Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2993 ATGACCGTGGTGGGTCCTGTCTCACATCGTCCCAATTTGGTCGCAAGTTCACAAGAAGCAGCAAGGAAACTGGAAGTCAGCGCTTGTCTAATACTCCATTCTAAAGCATCGGAGTGTTTTGTGAAGTACATTGGCATGGAGAAGACTACGCCCAATCACGCACAGACTGTTTCTGGATGGGCTGCTCACGATTCTTCTGGCAAAATTACCCCCTTCACTTTTCAACGAAGGGAGAACGGCGCTAACGATGTCACCATACAGATCTTGTACTGTGGGATCTGCCACACTGACCTTCACTATGCTAAAAACGACTGGGGCAACACTATGTATCCTGTAGTTCCCGGGCACGAGATCGTAGGGGTGATAACGAAGGTCGGAAGCAACGTGAAGGGATTTAAGGAAGGAGACAGAGCAGGGGTGGGGTGCCTGGCAGCCACCTGCCTCGACTGTGAATACTGCAACACTCATCAGGAGAACTACTGCCAACAATTACAGTTCACTTACAACGGCCTCTTCTGGGACGGCAGCATCACCTACGGTGGCTACTCCAACATGATAGTGGCCGATTACAGGTATGTGGTACACATACCGGAGAAGCTGAATATGGAAGGGGCGGCGCCGCTGCTGTGCGCCGGGATAACGGTGTTCAGCCCGATGAAGGATCACGGATTGGTGGAGAGCGGGGGGAAGAGGATAGGAGTGGTGGGGTTGGGGGGTTTGGGGCACATGGCGGTGAAATTCGGGAAGGCGTGTGGGCACCACGTGACGGTCATAAGCAGGTCGGCGGAGAAGGAGTGGGAGGCAAAGCACAGGCTGGGAGCCGATGAGTTCATAGTGAGCAGCGAGCAGAAGCAAATGGAGGGAGGGAAGAGGTCGCTGGATTTCATATTGGATACGGTGTCGGGGCAGCATACTCTGCTGCCTCTGCTGGAACTACTCAAGATCAACGGCACTCTGTTCATCGTGGGCGCCCCCAGCCAGCCGCTGGAGCTGCCGGTTTTCCCTCTGATATTCGGAAAAAGGTCGGTGAAAGGAGGCATCATCGGAGGCATCAAGGAGACGCAGGAAATGCTGTACCTGTGTGGGAAGCACAACATAACGTGCGACACAGAGTTGATAAGGCCGGATCAAATAAACGACGCCATGCACCGCCTCGCCAACAACGATGTCCGTTACCGTTTTGTCATTGACATTGCCTCTGCCTCTTCCTCTTCCTCTTCCCATCTCCCCGGCTCTCCCTGA 1242 0.5403 MTVVGPVSHRPNLVASSQEAARKLEVSACLILHSKASECFVKYIGMEKTTPNHAQTVSGWAAHDSSGKITPFTFQRRENGANDVTIQILYCGICHTDLHYAKNDWGNTMYPVVPGHEIVGVITKVGSNVKGFKEGDRAGVGCLAATCLDCEYCNTHQENYCQQLQFTYNGLFWDGSITYGGYSNMIVADYRYVVHIPEKLNMEGAAPLLCAGITVFSPMKDHGLVESGGKRIGVVGLGGLGHMAVKFGKACGHHVTVISRSAEKEWEAKHRLGADEFIVSSEQKQMEGGKRSLDFILDTVSGQHTLLPLLELLKINGTLFIVGAPSQPLELPVFPLIFGKRSVKGGIIGGIKETQEMLYLCGKHNITCDTELIRPDQINDAMHRLANNDVRYRFVIDIASASSSSSSHLPGSP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2993 413 SMART PKS_ER_names_mod 64 396 IPR020843 GO:0016491
Acco05g2993 413 Gene3D - 60 398 - -
Acco05g2993 413 PANTHER ALDEHYDE REDUCTASE 52 400 IPR047109 GO:0016616
Acco05g2993 413 Pfam Alcohol dehydrogenase GroES-like domain 82 195 IPR013154 -
Acco05g2993 413 SUPERFAMILY GroES-like 62 228 IPR011032 -
Acco05g2993 413 Pfam Zinc-binding dehydrogenase 239 359 IPR013149 -
Acco05g2993 413 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 200 366 IPR036291 -
Acco05g2993 413 Gene3D - 211 368 - -
Acco05g2993 413 CDD CAD1 59 397 IPR047109 GO:0016616
Acco05g2993 413 FunFam probable cinnamyl alcohol dehydrogenase 60 219 - -
Acco05g2993 413 FunFam Cinnamyl alcohol dehydrogenase 211 368 - -
Acco05g2993 413 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 115 129 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2993 Acco-ChrAcco05 44510715 44512982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2993 59 407 Monolignol Biosynthesis Gene Families AT2G21730 58.286 5.49e-145 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2993 05 44510715 44512982 Acco05g2993 05 44510715 44512982 ECH