Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2992 ATGGTCATTGATTCCTCTGATCATCACTCACCTACTAGTGTTGCGGATACCGGTAGCCCTAATTTCCCGCGAAATACGCTGACATCTCCGTGGGCTCAAGTTGTACGAGGTGGGGATTGCGAATCTCATCCATCGCCGCCTTCATCATCTTCCTCTTCGTCATCACTCACAACATCGGCGCCCGACCAACCACCATTCTCTGATTTTCCAAAGATGGAGGCACCTGCATCGCAGCTGCGGGATAACTCTAATGTTGTTGGTGCAGATAACTCTGACGCTGACGCTTCCGACGCCAATGCAGGTCGTTCTAGGAGGGCTGCTTGGAGCAAGCTTTCTAACGGCGTTGTCGAGGCTGGTCCAGTGATGGGCGCTGTTTCTTGGCCCGCATTATCTAAATCCACGAAGGTTTCGACCAAAATATCAGCTGACTCCACCTCTAAGACTCCCTCTGATGGATCACTCTCTACTTCTCAGGGATCTGGCACTTCACCATCCCCTCAAAAACAACCTACTAATAATGCAAAGCCTAACTCTGCAACTAACTATGCTGGGCACCATAGACAAAGGTCAATGAAACGTGGAGGTAGCAACAGCATTGGGGTTGGTCATGCTCAGAGCAGCTTTTCTAACCCTCCGCCAACTCCACCACCTCCGCCCTTTCCTGTTTTTCCTATACCGGGCAGTAGCTATGGTAATGTGGTGCCAGGGGTTCCAGATCATTCTCCAAGGGAAATCCCTTACAGGAACAATAACTGGGATGCAAGATCACCGGTTGGGGGTTTTGTGCCTGCTGTGAATGATCATTGGAATTCCCCCCGCCGAGGCAATTTTGGGACCCATCAACGTGGGGATGGATCCTATCATGGGGGTAGACGTGACCAGGACCGTGGAAATCATGCAAACACCAGAGATGCTCAAGTACACCAACAGAGGATGTCTCCTAGGGGATTAGCGAGGCACCCACCTCCTAATACTCCTTCATTTGTTGCCCCTCCGCCCATGGGACCCTTTGCAAACCCCATGGGTTTTCCAGAATTTCATTATTTCCCATCTCTACCTCTAGAGCCATTCCGGGGTATGCCGTTCATTACCCATGGTCCTCCTCCTGCAATGTTCCTCCCTGTTGCGGAACCTCCTGTGACAAATAAGATAGTGAACCAAATTGATTATTACTTTAGCGATGCTAATTTGGTCAACGATGAGTTTTTGATATCCAAAATGGATGAACAGGGTTGGGTTCCCATTGCTTTGATAGCAAACTTCCGTCGGGTTCAAAGTTTGACAACGGACATGAAGCTGATACTGGATTCATTGAGAAATTCTGCAGTTGTGGAAGTACAGGGTGACAAGTTGCGGAGGCGTAATGAATGGATGAAGTGGCTTCCCTCATCTCTTCGTCAGGCTGATTCTGGTTCATCATCTCCTGTTGGACCAAGTTACAGTAACCTAGCAGCTGATTTTCAAAAGATTGCTCTGGGTGAGACTGTTGCAGATAAAGGTAATTCAGACCCTACGTCAGAGGCCCTGGATGGAAGATGTCCGACAGATTCTTCCAGTCAACCTCAATTTCCAAACGGTGATACTACAGGGAACGCCAATTAA 1602 0.49 MVIDSSDHHSPTSVADTGSPNFPRNTLTSPWAQVVRGGDCESHPSPPSSSSSSSSLTTSAPDQPPFSDFPKMEAPASQLRDNSNVVGADNSDADASDANAGRSRRAAWSKLSNGVVEAGPVMGAVSWPALSKSTKVSTKISADSTSKTPSDGSLSTSQGSGTSPSPQKQPTNNAKPNSATNYAGHHRQRSMKRGGSNSIGVGHAQSSFSNPPPTPPPPPFPVFPIPGSSYGNVVPGVPDHSPREIPYRNNNWDARSPVGGFVPAVNDHWNSPRRGNFGTHQRGDGSYHGGRRDQDRGNHANTRDAQVHQQRMSPRGLARHPPPNTPSFVAPPPMGPFANPMGFPEFHYFPSLPLEPFRGMPFITHGPPPAMFLPVAEPPVTNKIVNQIDYYFSDANLVNDEFLISKMDEQGWVPIALIANFRRVQSLTTDMKLILDSLRNSAVVEVQGDKLRRRNEWMKWLPSSLRQADSGSSSPVGPSYSNLAADFQKIALGETVADKGNSDPTSEALDGRCPTDSSSQPQFPNGDTTGNAN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2992 533 SUPERFAMILY "Winged helix" DNA-binding domain 372 462 IPR036390 -
Acco05g2992 533 MobiDBLite consensus disorder prediction 495 533 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 319 333 - -
Acco05g2992 533 SMART la 378 456 IPR006630 -
Acco05g2992 533 MobiDBLite consensus disorder prediction 1 224 - -
Acco05g2992 533 ProSiteProfiles La-type HTH domain profile. 374 463 IPR006630 -
Acco05g2992 533 FunFam la-related protein 1B isoform X2 370 460 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 6 32 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 511 533 - -
Acco05g2992 533 PANTHER LUPUS LA PROTEIN-RELATED 124 470 IPR045180 -
Acco05g2992 533 Pfam La domain 384 440 IPR006630 -
Acco05g2992 533 MobiDBLite consensus disorder prediction 43 64 - -
Acco05g2992 533 Gene3D - 374 463 IPR036388 -
Acco05g2992 533 MobiDBLite consensus disorder prediction 285 302 - -
Acco05g2992 533 CDD LAM 382 454 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 266 333 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 209 224 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 130 185 - -
Acco05g2992 533 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2992 Acco-ChrAcco05 44502848 44507167 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2992 05 44502848 44507167 Acco05g2992 05 44502848 44507167 ECH