Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2979 ATGCATTTCTTTCATCTTCATTATTCCCTATGCATTCATCTCATTTCTCTTCTGCTTCTGAGGGGTGCATCGGGGGTCACTTTCACCGTGACCAACAAGTGTGACTACACTGTATGGCCTGGAATTCTGGCCAATGTAGGCACCTCCGCGCTGAGCACCACCGGATTTGAGCTCCAACCGGGTGGATCTCGGAGTCTCCAAGTCCCGCCCAGCTGGTCCGGAAGGCTATGGGGCCGAACCGACTGTGCTTTTGACCCCAATAGCGGCCAGGGTAGCTGCGTCACCGGGGATTGTGGCTCCAACCAGGCCGAATGCAATGGGTCTGGAGCGATCCCACCGGCAACACTGGCGGAGTTCACCATCGGGTCGGGTGGCCAAGACTTTTACGACGTCAGCCTCGTGGACGGCTACAATTTGCCTATGCAGATTAATGCGGCTGGAGGTTCGGGATCCTGTGCGTCCACAGGCTGCGTGGCGGATCTGAATCGGCGGTGCCCGAATGAGCTTCGGGTCGGGGGGCATGCGGCTTGCAAGAGTGCATGCGAGGCATTTCGGAGCCCCGAGTACTGTTGCAGCGGCGCGTATGCTTCACCTGCAACTTGTAAGCCGTCAGTTTATTCGCAGATATTCAAATCGGCATGTCCCAAGTCGTACAGCTATGCCTACGATGATTCCACGAGCACATTTACGTGTAGTGGGGCGGATTACACGATCACATTCTGCCCCGCCACCGCAAGCCAGAAATCGGCAAGAGATTCAGCTCCAGTAAATGGGACTGGGGGAATGCCAATGGGAATTAACAGTGAGTGGCTTCCAGACTTTTTTATTTCACCATCGCCAAAGTCAGTGTCATCTTCAGCCTCTTCAACTGCTACTCTCATTGTATTCATCTTCCAAACGATGCAACATTTGCGATGA 918 0.5425 MHFFHLHYSLCIHLISLLLLRGASGVTFTVTNKCDYTVWPGILANVGTSALSTTGFELQPGGSRSLQVPPSWSGRLWGRTDCAFDPNSGQGSCVTGDCGSNQAECNGSGAIPPATLAEFTIGSGGQDFYDVSLVDGYNLPMQINAAGGSGSCASTGCVADLNRRCPNELRVGGHAACKSACEAFRSPEYCCSGAYASPATCKPSVYSQIFKSACPKSYSYAYDDSTSTFTCSGADYTITFCPATASQKSARDSAPVNGTGGMPMGINSEWLPDFFISPSPKSVSSSASSTATLIVFIFQTMQHLR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2979 305 SUPERFAMILY Osmotin, thaumatin-like protein 26 242 IPR037176 -
Acco05g2979 305 CDD TLP-PA 27 241 - -
Acco05g2979 305 ProSiteProfiles Thaumatin family profile. 25 242 IPR001938 -
Acco05g2979 305 PANTHER OS03G0233200 PROTEIN 16 242 IPR001938 -
Acco05g2979 305 SMART tha2 28 242 IPR001938 -
Acco05g2979 305 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Acco05g2979 305 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Acco05g2979 305 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Acco05g2979 305 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Acco05g2979 305 FunFam THAUMATIN-LIKE PROTEIN 1 26 242 - -
Acco05g2979 305 Gene3D Thaumatin 26 242 IPR037176 -
Acco05g2979 305 Pfam Thaumatin family 32 242 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2979 Acco-ChrAcco05 44404532 44406276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2979 9 258 Receptor kinase-like Gene Family AT5G38280 49.615 1.41e-80 255