Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2962 ATGCACACTATTTGCTGTTGGAAGCAAAGCGAAGAGAGAGAAGTAGAGAACAGAGGAGAGAGGGCTTTGGTAATGGTGCTTTTGCTTGACAGGAAAGAAGGAAAGGATGATGGGGGTATGAGAGGCTTCACTGAAAGGTGCAGAGCGATGGCTTTCGTCGAAGATATGGTTAAAACCGGAGGATTAATTGTTGGGGCTCAATCTCTAGCTGCGGAGATGAAGATGTTGAAAGAAATGCAGGAGCAATCTGGGGTCCGTAAGAGTATAAATTCTGAGTTATGGCATGCTTGCGCTGGCCCACTTGTAAGCTTGCCTCAGTTGGGGAGTCTGGTGTATTACTTCCCTCAGGGACACAGTGAACAGGTGGCGGCTTCCACTAGAAGAACAGCAACTTCACAGATTCCAAACTATCCGAATCTTCAATCTCAGTTGCTTTGCCAAGTTCAAAATGTCGCACTTCATGCAGATAAAGACACGGACGAAATATACGCTCAAATGAGTCTCCAACCATTGAATTCCGAAAAAGATGTCTTCCCCATATCTGACTTCGGGATGAAGCCTAGTAAACATCCAAGTGAATATTTCTGCAAAACTTTGACTGCTAGTGATACAAGCACGCATGGTGGCTTTTCTGTACCTCGCAGGGCTGCAGAAAAGCTCTTTCCTCCATTGGATTATGCCATTCAGCCCCCGACACAAGAACTCGTTGTGCGAGACTTACATGAAAATACTTGGACATTCCGACATATATACCGAGGCCAGCCGAAGAGACATCTTCTCACAACAGGATGGAGTTTATTTGTTGGCTCAAAGAGGCTCAAAGCTGGTGATTCTGTTCTTTTTATCAGGGACGAGAAATCACAATTGCTAGTTGGTGTTAGGCGTGCAAATCGTCAACAGACAACATTGCCGTCATCTGTCCTTTCTGCCGATAGCATGCATATTGGCGTGCTTGCTGCTGCAGCTCATGCTGCTGCCAATCTGAGCCCGTTTACTATTTTCTACAACCCAAGGGCATGCCCTTCAGAATTTGTTATCCCACTGGTTAAATACAGAAAAGCTGTATATGGTACCCAGCTCTCAGTGGGCATGAGATTTGGTATGATGTTTGAGACTGAGGAATCGGGTAAGCGCAGGTATATGGGCACTATAGTAGGTGTCAGTGACTTGGACCCTTTGAGGTGGTCTGGTTCAAAGTGGAGAAATATTCAGGTGGAGTGGGATGAGCCTGGGTGTGGCGATAAGCAGAATAGAGTTAGTGCTTGGGAAATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCGAGTCTAAAACGACCATTTCAATCTGGATCTTTTGGTACGGAAAATGAGTGGGGGACTTTGTTAAGAAGGCCTTTTATACAAGTTCCTGAGAATGCAAATTTGGAGCTCCCAGACTCTTTACAAAATATGTACATGGAACACCTGATGAAGGTTCTTTTTAAACCTCAACTGGTGAACAATCCTGGAGCGTTTTCACTGGTCATCCAGCAAGAATCTGCTGCCAAGAGTGATCTCTCACAAGATTTGAAGAAGACTCTAGCGGCAGAGAGCCAAAAAGCTCATCTTGTATGTTCAGGGAGCATACCTCCAAAAAATCCAGATAACTCTCAATCTCTCCCTGACCAACCTAATGCCTTCAACTTGCATTCCCTGTTGAAAAGTGATCAAACTGGGAAATTGCACCGTCAGCCTAAAATTGAGAATTCTCAATCTTCTGGAGCAGTTTCTGACAGTACAAAGTTAGAATCGGTGGACTTAACTGACCAAATTTTTGACTGTCCTTCAACAGAAGGATGCAACATTGAAAAAGTGGCGGCCAACCCTATGAACCCACCTGGCCATGTGAGTCAAATGGCAATACTTAATCAAAACCAGAGCCCATGGCCCGTGCAGCATCAATTAGAATCAACAATACCTCATTCTCAAATGGTTGATATTCCTCAATCTGATTACGCTCTTTTAAATGGCCTGCTTCCTCAGGCAGACGTTGATGAATGGATGTTGTATTCTTCCTGCCAATCTTTTCCCGGAGTGAGTAGACCAGCTGGGCTTTTGCAAGAGCAGTCTACACTTGTCCCACAAGCAATTAATACTATCCCTTTACCTTCCGTGAGTCAAGAAATGTGGGATCATTATCTGAAAAATTTCAAGTCCTTACCTCAAGCAGACCAGTTAACACCCATCTCACAGCAAGGGTTTCACAATTTCAATTGTATGTCTAATCCAAATAACCTGAGGGATCTATCAGCTGAGAGCAATACCAAAAGCGGGGTGCATAGCAGTGTCAATGTGGATGCTAGTAACAGTGTAAGTACTATGGTTGATCCTTCTACTTCGAGTACCATTTTGGATGATTTTTGCGTGTTGAAGGATGGGGAGTTCCAGAACCCATCAGAATGCATGGTTGGCAACGTAAGTTCGAGCCAGGACGTACAGTCTCAGATAACCTCCGCAAGTCTAGCTGAGTCGCACGTTTTCCCTCTGCAAGACATAACTGACAACTCTGGTGGTGGTACTTCTTCAAGCCACGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCGTGGGCGCATGTTGCTGCACCTGTGCGAACCTACACCAAGGTTCAAAAGGCAGGGTCAGTAGGAAGATCATTAGATGTAACCACTTTTAAGAACTACGAGGAACTGATCTCCGCAATTGAACGGATGTTTGGACTTGAGGGTCTTCTGAACGACACCAAAGGTTCAGGATGGAAATTGGTATATGTTGATTACGAAAACGATGTTCTGCTTGTTGGGGATGATCCTTGGGAGGAATTCGTGGGATGTGTCCGGTGCATCAGGATATTATCTCCGGTGGAAGTGAAACAGATGAGCGAGGAGGGAATGAAGCTTCTAAACAGTGCTGCGGTGCAACAGTCCAATGGAACCATGTCAGGTGGCTGCCCTTAG 2970 0.4492 MHTICCWKQSEEREVENRGERALVMVLLLDRKEGKDDGGMRGFTERCRAMAFVEDMVKTGGLIVGAQSLAAEMKMLKEMQEQSGVRKSINSELWHACAGPLVSLPQLGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLQSQLLCQVQNVALHADKDTDEIYAQMSLQPLNSEKDVFPISDFGMKPSKHPSEYFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYAIQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANLSPFTIFYNPRACPSEFVIPLVKYRKAVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGVSDLDPLRWSGSKWRNIQVEWDEPGCGDKQNRVSAWEIETPESLFIFPSLTSSLKRPFQSGSFGTENEWGTLLRRPFIQVPENANLELPDSLQNMYMEHLMKVLFKPQLVNNPGAFSLVIQQESAAKSDLSQDLKKTLAAESQKAHLVCSGSIPPKNPDNSQSLPDQPNAFNLHSLLKSDQTGKLHRQPKIENSQSSGAVSDSTKLESVDLTDQIFDCPSTEGCNIEKVAANPMNPPGHVSQMAILNQNQSPWPVQHQLESTIPHSQMVDIPQSDYALLNGLLPQADVDEWMLYSSCQSFPGVSRPAGLLQEQSTLVPQAINTIPLPSVSQEMWDHYLKNFKSLPQADQLTPISQQGFHNFNCMSNPNNLRDLSAESNTKSGVHSSVNVDASNSVSTMVDPSTSSTILDDFCVLKDGEFQNPSECMVGNVSSSQDVQSQITSASLAESHVFPLQDITDNSGGGTSSSHVDFDESSFLQNNSWAHVAAPVRTYTKVQKAGSVGRSLDVTTFKNYEELISAIERMFGLEGLLNDTKGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPVEVKQMSEEGMKLLNSAAVQQSNGTMSGGCP 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2962 989 FunFam Auxin response factor 872 965 - -
Acco05g2962 989 MobiDBLite consensus disorder prediction 535 590 - -
Acco05g2962 989 Pfam B3 DNA binding domain 195 296 IPR003340 GO:0003677
Acco05g2962 989 ProSiteProfiles B3 DNA-binding domain profile. 195 297 IPR003340 GO:0003677
Acco05g2962 989 FunFam Auxin response factor 359 431 - -
Acco05g2962 989 SUPERFAMILY CAD & PB1 domains 889 955 - -
Acco05g2962 989 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 86 966 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco05g2962 989 Gene3D - 193 296 IPR015300 -
Acco05g2962 989 SMART B3_2 195 297 IPR003340 GO:0003677
Acco05g2962 989 MobiDBLite consensus disorder prediction 540 565 - -
Acco05g2962 989 Pfam Auxin response factor 321 404 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco05g2962 989 MobiDBLite consensus disorder prediction 574 590 - -
Acco05g2962 989 ProSiteProfiles PB1 domain profile. 876 960 IPR000270 GO:0005515
Acco05g2962 989 FunFam Auxin response factor 193 297 - -
Acco05g2962 989 Pfam AUX/IAA family 873 961 IPR033389 -
Acco05g2962 989 Gene3D - 359 431 - -
Acco05g2962 989 Gene3D - 872 965 - -
Acco05g2962 989 SUPERFAMILY DNA-binding pseudobarrel domain 183 324 IPR015300 -
Acco05g2962 989 CDD B3_DNA 194 295 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2962 Acco-ChrAcco05 44260766 44266498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2962 68 977 B3 DNA Binding Superfamily AT1G19850 60.022 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco05g2962 AUX_IAA 3.4e-10 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2962 05 44260766 44266498 Acco05g2962 05 44260766 44266498 ECH