LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco05g2959	ATGCGTTGTTTACACAAATCGAAAAGAGTTTCTTGGGCCTCAGATTTAGATCTTTGTCAGGTTAGATTATTTTTATCAGAGGATTGTCCTTCGCATGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGATATCATTGCTGTCGCAACCAGGAGGAGCAGGTTATGATTGCATTCTACCTCCTGGCTTTGAGGGAACTCAATCCTCAAGTCAGACGCAGATTAAGCTCTCCCAGATTCCAGTGATCAGATGGACCGATCCACTTAAGATTGTGCTTAATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAAAATCAGAGAGAGATGAAAGTACTTGAAGCCATTTATCCCCGCCCATCTTCGATACCTCCAAACCCCTCTGTCTCAGTGGATGTAGAAGACTCCCTTTACAACGATGACCATACGGCTTTGATACCGATTACACCAATTGAAGATGAGGATCCCACAGTAGACGCATCATCTGGATTGCCACCTAGTTCACAGCATCTTTTATTTGTTGCTGGAGTACCCGGGGGTTATAATTCTTCTCAAATTACGCAATTACCCCATGTAGTAGAATCTGAGGCTGCTGAAGCATCTGTAGCTTTAAACCATATCATGAAGAACAGTGAACATGGAATTTTGATTGACCATGAATTACTGAATAAAATTCTCAGTAACCCAGAAGTGATTGAAAAGTTGGTCAGAGATCATGGAAATACGAATAACTCACAGCATACATCGAGCGCTAGCTCATCCTTGGTCACTTCACGACCCCCCGTTAGTCTGAGTCAAACTGAAACCAGTACACCTTCATTTGGTGGCTTTTCAGCTAGTCCTTCCTATCCTGCTCAGATTGTTGGTGGAGTGGGACCTGTTCCTCCTCAACGGGTCCCTCTGCCTGTAGGTAGTCTTGGAGCTCCTCCAGCAAAGGATGTGAACTACTATAAGAGCTTAATTCAGCAACATGGTGGAGAAAAACAGGAGGCTCTTCCTTATATGAACAACATTAGGCAACCCGAAGGAAACCAGGAGACAGCACACAATTCTAGACTAAGGGAACCCAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTTCAAAAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGTGGCGTTTCAGCCTCGTGGTAGTGCTGTGCCGGGCGTACAAAGTTCAAAGAGAATCAAAATGGATAGCGAGATTAGCAGTTGGTTAGACTCTTGA	1266	0.4431	MRCLHKSKRVSWASDLDLCQVRLFLSEDCPSHVGLNAQDHLQAKISLLSQPGGAGYDCILPPGFEGTQSSSQTQIKLSQIPVIRWTDPLKIVLNLTWQVVAGEESKEVEDQNQREMKVLEAIYPRPSSIPPNPSVSVDVEDSLYNDDHTALIPITPIEDEDPTVDASSGLPPSSQHLLFVAGVPGGYNSSQITQLPHVVESEAAEASVALNHIMKNSEHGILIDHELLNKILSNPEVIEKLVRDHGNTNNSQHTSSASSSLVTSRPPVSLSQTETSTPSFGGFSASPSYPAQIVGGVGPVPPQRVPLPVGSLGAPPAKDVNYYKSLIQQHGGEKQEALPYMNNIRQPEGNQETAHNSRLREPKPKIMKPCIYFNSSKGCRNGANCAYQHDVAFQPRGSAVPGVQSSKRIKMDSEISSWLDS	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco05g2959	421	ProSiteProfiles	Zinc finger C3H1-type profile.	364	392	IPR000571	GO:0046872
	Acco05g2959	421	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	252	412	-	-
	Acco05g2959	421	MobiDBLite	consensus disorder prediction	246	283	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco05g2959	Acco-ChrAcco05	44247321	44250606	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Acco05g2959		None	None	None