Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2953 ATGGATGGCGAAGTGAAGAGGGCTGGGACCAAGAAAAGATCGAAACAGGTTGAAACTGGTGTTGATTCGGATGATAACGAACCCATTGGGTCTCTATTCAAGCTGAGAAGGCCACGTAACTCCAAGAACGTTAATTTGACTTTAGAGGGAACTGGTGATAGATTTCAGAATGCTGAGGCTGCCGGGAAGAAATTGGCTGATGCAGAAGAGGATTCTGGGGGTATGGATGATACCTTAGCCAGTTTCCGGAAAAGATTGAAGGGTCCAAAGAGAGATCAGGGATCTGGAACCACCAGGGGAAGAAATTCTGCTTTGGATGTGGTTGCTTGTAGTTCTTTGGATGTTTCATCTTCATGTGGGGGTCTAGAAAATGTGAAGGAAAGGCTGCTTTTGGGTAATAATGGATCTGATACGATGTCTGAGAAAGCAGCAGGCAGCAATCAAGGCAACTTCAAGCAACTTCACATGGATCTGAAGGGAAGAGAGGGTTACATTCCATCCAATGATGATTTGATTGCTTGGAAATCCAGGAGTGTATGGAAGGATGAGAAAGGGTTGGTTTCAATGCCAGACAATGGCCTACAACACTCTTCTGAAGAACAGAAGGAAGATTCATTATCTTCAATTTTCCATAATGCACAGTCTAATATGAGTAGGAAATCTCGTGCATCATCAAGTTTAAAGCAGAAAACTGGGAGTCAGATTGTGGGCGATGGGTTGAACCCCATTCTTTTGAAAAGCATGCCAGAAACTGTAGAGTCTGTGGCTGATTGTGGATCTAAATCTATTTCTGCCTTAATATCAGGCAATAGAATTTTGAAATATGCCAATGATTTGCCTCAAGGATCACATTCACATTCACCTGCTTCAGCATCCGTAATGGATAATAAAAAGTTTAGTCATGGATGTCTTCAAGAGGAAATTTCTAAGGGCATTTTTCATTCAAACATTCAAAATGGACTAGCAGTTGGAGATAGCCAGCAAAAAGTTCAACTTGGTGATGGTTTGGAGTCTACGACTGATGTCTGCAATGAAGACAGCCAGCAATCATCTTTTGTTCAACTTGGAGATGCTTGCTCTCCTTCCCACCAAAAGGTTACATTTCAAGAAAGAATTGTCAGTGATGTTTTGGAGCATTGTTCTGTTAGGTTACATGGCCCTGAAGAAATGGCTGACACTACCTCACTATCAGAAGTGAGGGGAGGGCCATGTGGCAATAGTGAGTCTGAGTTCAAGGAAACTTTAACAGATAAACTGAAAGTAACATGTAATGATAGAAGAGAAGACGATGATCTTATGGATGTGGGGAAAGAAATTGCCTCTCGTCCTTCAGTCTCTGAGTCCTTGAATAGATTAAGTGAAAATTTACTCTATGAGAATGATCAACTGGTTTCTGGAAAAGTTTCGGAGGAATCCTCTGGATTTGGGGCTCTGAAATTCTCTGGATTCCATGCCAAGGTAGATGGTGGTAGCCTGGATACAAAAGATGGACTACAAGATCTTGTTTCAGGTTTTTCAGCGGAAAAAAATGATGTAATTTCTGTTGGTAATTTACCTCCAATGATGTCTGATGAAGCTGAGGAAAATAAATTGGGCGCCCAGTCAAATTGCTCTTCAAAACCTTTACAACCTTGTGTCATTCTAACTGATTCTACTGTGTCCATTCAGAAATGCAGCTCAGTATTACATCAAATTCAATCTTCTAATGATACATCTGAAGAGGGATCTCTTCCAAATGATGATCATCTTTATGCCACAAAAGGAGCTGATGGAACCTCACCACCTGTAGTTCCGGAAGAAACTGATAATTATGTAGAATATGCTGTCTCTGGGTCTGAGTTTTCTGACAAATGTGATAAGATATCAGCTGTTCAGCGTGCCATGCGTAAGGCCAAAAAGCGCAGGCATGGAGATATGGCTTATGAAGGGGATGCAGACTGGGAGATTTTAACAAATGATCAATCTTTTCTTGAAAGCCGAGGAGTTGTAGGTGATGAACGGGCTCTCAGACCAAGAATGAAGAATGGTTCCTCTTTGAATGCTGATGAAGAGTCGGAAAGTGTTGCAGCAGCAGTATCAGCTGGTTTGAAAGCTCATGCAGTTGGTCCAGTTGAAAAGATAAGGTTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCCAGGACTATTTGTGTTGTAGAAATCAGATCTTAAGTATTTGGAGCAGAGATGTCACTCGCATTTTGCCTCTTTCTGACTGTGGAGTCATTGATACTCCATCTGAGGATGAATCTCCCCGTTCTTCTCTTATTAGGGAAGTCTATGCTTTTCTTGATCAATGTGGTTATATAAATGTTGGGATTGCCACTCAAAAGAATGCTGGAGCCAGTGCTGGGAATAGTTATAAACTTGTAAAAGAAAAGGGATTTGAGGACAGTTCCACAGCTTCCATGGCTGACTCTGAAGATGGAGTTACCTTCATTGTTGGTCATGCTACTGGGTCAGGTACTTCCATGAAAATTGATGGTCTTAAAGTTGATCATGTAAACATGGCACCTGAAGCTACAGAAGGCAATAGGGATGGTGATCCAATGGTGTCAAATCTATCAAATATACAGGATCATGAAGAAAGAAAAATTGATGGTTACCAAGAAAATGATGGGATTCTGGCAAGTGGAGTTGGGCTTATAAACATTAACAGTTCTGATCCTTCTTCCAACCATTCTGATTGTAGAATGACTTCTATTGCAACCACCGAGAAAAGCAACGAGTCTACCTCTGTGAAATATACCTTAGTTGATCAGAAACCTGATCCTTTGCAGTCTGATCTGGAGGCTGTGAAAAGAGTGATTGTCATTGGAGCTGGTCCCGCTGGATTAACTGCTGCTCGCCACATGCAACGTCAGGGTTTTTCTGTAACAGTACTTGAGGCTAGGAATAGAATAGGGGGTCGTGTATTTACTGACCGTTCATCTCTTTCTGTTCCTGTGGATCTTGGTGCTAGCATTATCACTGGAGTTGAGGCTGATGTGACCACTGAGAGAAGATCAGATCCTTCATCTTTGATTTGTGCTCAGTTGGGCCTTGAGTTGACTGTGCTAAAAAGTGACTGTCCTCTTTATGACATAATAACAGGACAGAAGGTTCCTGCTGACCTGGATGAAGCATTGGAAGCTGAATATAATAGTCTTCTAGATGACATGGTATTGCTTGTTGCCCAGAAGGGTGAACAAGCTATGAAAATGTCTCTAGAAGATGGTTTAGAATATGCTCTTTTAAGGCGTCGAATGACACGCTTAAGTAGAAGTAGTGAGGAAGTTGGACAAACCAATTTTGCTGATATGCCATTCAATGCCAAAAGAGGCGATGCTGTGGAAAACATTATTCAGGAGGAAATTTTGAGTCCTCTAGAACGGAGGGTTATGGATTGGCACTTTGCTCATTTAGAGTATGGCTGTGCAGCTCTTCTTAAGAAGGTTTCCCTTCCCTACTGGAATCAAGATGATGTTTATGGTGGATTTGGGGGTGCTCATTGTATGATTAAAGGGGGTTATAGCGCTGTTGTTGAGTCTCTAGGAGAAGGGCTTATTATTCACCTGAACCATGTTGTAACAAATGTGTCATATGGTAAGGAGCCTGGCCGGAGTGACACAGTCAGAATTTCTACTTCAAATGGCAAGGAGTTTGCTGGTGATGCTGTCCTTATCACTGTTCCACTGGGCTGTTTGAAGGCTGAAACTATAAAATTCTCCCCACCTTTGCCTCAGTGGAAGTGCTCTTCCATCCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTAATTTTGGAATTTCCTAGTGTGTTTTGGGATGATGCGGTGGACTACTTTGGAGCAACAGCAGAAGAAACAAGCACAAGAGGTCACTGTTTTATGTTCTGGAATGTCAGGAAAACGGTTGGGGCTCCGGTCCTTATAGCATTGGTTGTTGGTAGGGCTGCAATAGATGGCCAATGTTTGAGCTCTGCTGATCATGTTAACCATGCATTAATGGTTCTCCGTAAGCTTTTCAGGGAGGATTCTGTACCCGATCCTGTTGCATATGTTGTGACTGATTGGGGCAGGGATCCTTATAGCTATGGTGCTTACTCGTATGTTTCTGTAGGAGCATCTGGAGAAGACTACGATATATTAGGGAGGCCAGTTGATAATTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCATCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGGGAGGCTGTGCGAATTATTGACCTATTGAACACTGGTAATGATTATACTGCTGAAGTGGAGGCAATGGAGGCAGCACTGAGACAGTCGGATACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTAGATGCAGTCGAGCTTTCAAATGCCTTGTACAAGAACTCTTTAGATGGTGCTCAAATCATTACTCGTGAAAGCTTACTAAGGGACATGTTCTTCAATGCAAAAACCAGTGCTGGTCGCTTGCATGTGACCAAACAGTTGTTGAGTCTTCCTGTTGATAACTTGAAATCCTTTGCTGGGAGTAAAGAGGGGCTCACTATTCTTAACTCATGGATACTGGATTCTATGGGGAAGGATGGGACCCAAATCTTGCGGCACTGTGTGCGTCTCCTTGTGCGGGTTTCAACTGATCTGGTTGCTGTGCGCTTATCAGGCATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATACGTGCTATTGCCAGCCAGTTGGTCAGTGTATGGCTTGAAATCTTCCGCAAGGAAAAATCTTCTAATGGTGGATTGAAGTTTTCAAGACATGCAACCACTGCAGATTTATTAAAGAGAAAATCTCTGAAAGATTCAACCTCAGGAAAGCCACCTCTGACTATGCATCATGGTGCTTTTGAGAATAAAGGAGGTTTACTGGCTTCTGCATCTGCTGGAAGTAGTTCACCTTCCATTGCAAATGGGAAGAAATTGCACAGAAAACAAGTAAAACGGCAGGAGGCAAATGACTCAAGGCATAATGTCAATTCGGCTTGGTCTCAAGGTTCAGTAGGCAAAGCAGTTACTGAGGAGGATGGTAATTGTTGTGTTTTGTCCGAAGAAGAACAGGCTGCCATTGCCGCAGCAGAAGCTGCTCGTGCTAAAGCACTTGCTGCTGCTGAGGCTTATGCCTCAGCTGAAGCCAGGGGCAATTCGCTGCTGCAGCTTCCAAAGATACCCTCATTCCATAAATTTGCTAGACGTGAGCATTATCCATCTAATGATGAATATGATAGTAGGAAAAAGTGGTCTTGGGGTGATCTAGGAAGGCAAGATTGTATTTCGGAGATAGATTCCAGGAATTGTAGAGTCAGGGACTGGTCGGTTGATTTTTCTGCTGCTTGTGTTGACCTTGACAATGCCAAAGTGTCAGTTGATAACCTATCACAGCGGAGTCATTCAAATGAGATTGCTAGCCACTTGAATTTCGGAGAGCACTCAGGAGAAAGTATTGCTTTGGACAGCTGTTTATATACAAAAGCATGGATTGACACCACTAGTGGTGTGGGGATCAAAGACTATCATGCCATTGAGAGGTGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCAACCATGCATTTGAAGGATGAGGAAGAATCAAATGCCTGTTCAACATTACCTAGGTGGAAACGTGATTGTATGGCAAATGAGAGCTCTGTTTCACAGGTTACTGTAAATATGGAGGCCTCAAAATGTCATAGTCGAGGGGCAGATCGCATTAAACAGGCTGTTGTTGATTATGTTGCATCACTACTTATGCCCCTTTATAAAGCGAGGAAACTGGATAAGGATGGGTACAAGGCTATAATGAAGAAAAGTGCAACTAAGGTGATGGAGCTAGCCACAGATGCCGAGAAGGCCATGGCTGTTCATGAATTTCTAGATTTTAAGCGAAAGAATAAGATACGATCGTTTGTGGACAAATTGATTGAGAGATACATGGCAGTGAAGCCAGATGCAAAATCTTAA 6033 0.4263 MDGEVKRAGTKKRSKQVETGVDSDDNEPIGSLFKLRRPRNSKNVNLTLEGTGDRFQNAEAAGKKLADAEEDSGGMDDTLASFRKRLKGPKRDQGSGTTRGRNSALDVVACSSLDVSSSCGGLENVKERLLLGNNGSDTMSEKAAGSNQGNFKQLHMDLKGREGYIPSNDDLIAWKSRSVWKDEKGLVSMPDNGLQHSSEEQKEDSLSSIFHNAQSNMSRKSRASSSLKQKTGSQIVGDGLNPILLKSMPETVESVADCGSKSISALISGNRILKYANDLPQGSHSHSPASASVMDNKKFSHGCLQEEISKGIFHSNIQNGLAVGDSQQKVQLGDGLESTTDVCNEDSQQSSFVQLGDACSPSHQKVTFQERIVSDVLEHCSVRLHGPEEMADTTSLSEVRGGPCGNSESEFKETLTDKLKVTCNDRREDDDLMDVGKEIASRPSVSESLNRLSENLLYENDQLVSGKVSEESSGFGALKFSGFHAKVDGGSLDTKDGLQDLVSGFSAEKNDVISVGNLPPMMSDEAEENKLGAQSNCSSKPLQPCVILTDSTVSIQKCSSVLHQIQSSNDTSEEGSLPNDDHLYATKGADGTSPPVVPEETDNYVEYAVSGSEFSDKCDKISAVQRAMRKAKKRRHGDMAYEGDADWEILTNDQSFLESRGVVGDERALRPRMKNGSSLNADEESESVAAAVSAGLKAHAVGPVEKIRFKEILKRKGGLQDYLCCRNQILSIWSRDVTRILPLSDCGVIDTPSEDESPRSSLIREVYAFLDQCGYINVGIATQKNAGASAGNSYKLVKEKGFEDSSTASMADSEDGVTFIVGHATGSGTSMKIDGLKVDHVNMAPEATEGNRDGDPMVSNLSNIQDHEERKIDGYQENDGILASGVGLININSSDPSSNHSDCRMTSIATTEKSNESTSVKYTLVDQKPDPLQSDLEAVKRVIVIGAGPAGLTAARHMQRQGFSVTVLEARNRIGGRVFTDRSSLSVPVDLGASIITGVEADVTTERRSDPSSLICAQLGLELTVLKSDCPLYDIITGQKVPADLDEALEAEYNSLLDDMVLLVAQKGEQAMKMSLEDGLEYALLRRRMTRLSRSSEEVGQTNFADMPFNAKRGDAVENIIQEEILSPLERRVMDWHFAHLEYGCAALLKKVSLPYWNQDDVYGGFGGAHCMIKGGYSAVVESLGEGLIIHLNHVVTNVSYGKEPGRSDTVRISTSNGKEFAGDAVLITVPLGCLKAETIKFSPPLPQWKCSSIQRLGFGVLNKVILEFPSVFWDDAVDYFGATAEETSTRGHCFMFWNVRKTVGAPVLIALVVGRAAIDGQCLSSADHVNHALMVLRKLFREDSVPDPVAYVVTDWGRDPYSYGAYSYVSVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEAMEAALRQSDTERDEVRDIIKRLDAVELSNALYKNSLDGAQIITRESLLRDMFFNAKTSAGRLHVTKQLLSLPVDNLKSFAGSKEGLTILNSWILDSMGKDGTQILRHCVRLLVRVSTDLVAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKEKSSNGGLKFSRHATTADLLKRKSLKDSTSGKPPLTMHHGAFENKGGLLASASAGSSSPSIANGKKLHRKQVKRQEANDSRHNVNSAWSQGSVGKAVTEEDGNCCVLSEEEQAAIAAAEAARAKALAAAEAYASAEARGNSLLQLPKIPSFHKFARREHYPSNDEYDSRKKWSWGDLGRQDCISEIDSRNCRVRDWSVDFSAACVDLDNAKVSVDNLSQRSHSNEIASHLNFGEHSGESIALDSCLYTKAWIDTTSGVGIKDYHAIERWQSQAAAADSYFSNPTMHLKDEEESNACSTLPRWKRDCMANESSVSQVTVNMEASKCHSRGADRIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMELATDAEKAMAVHEFLDFKRKNKIRSFVDKLIERYMAVKPDAKS 2010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2953 2010 MobiDBLite consensus disorder prediction 1 101 - -
Acco05g2953 2010 SUPERFAMILY Homeodomain-like 686 782 IPR009057 -
Acco05g2953 2010 MobiDBLite consensus disorder prediction 1 22 - -
Acco05g2953 2010 Gene3D - 686 789 IPR036388 -
Acco05g2953 2010 ProSiteProfiles SWIRM domain profile. 687 787 IPR007526 GO:0005515
Acco05g2953 2010 Pfam SWIRM domain 697 777 IPR007526 GO:0005515
Acco05g2953 2010 MobiDBLite consensus disorder prediction 213 234 - -
Acco05g2953 2010 MobiDBLite consensus disorder prediction 1645 1659 - -
Acco05g2953 2010 MobiDBLite consensus disorder prediction 38 52 - -
Acco05g2953 2010 SUPERFAMILY FAD/NAD(P)-binding domain 940 1423 IPR036188 -
Acco05g2953 2010 Gene3D - 942 1418 IPR036188 -
Acco05g2953 2010 Gene3D - 1029 1375 - -
Acco05g2953 2010 MobiDBLite consensus disorder prediction 63 94 - -
Acco05g2953 2010 Pfam Flavin containing amine oxidoreductase 950 1420 IPR002937 GO:0016491
Acco05g2953 2010 MobiDBLite consensus disorder prediction 1616 1689 - -
Acco05g2953 2010 PRINTS Adrenodoxin reductase family signature 941 963 - -
Acco05g2953 2010 PRINTS Adrenodoxin reductase family signature 964 977 - -
Acco05g2953 2010 MobiDBLite consensus disorder prediction 567 597 - -
Acco05g2953 2010 PANTHER FLAVIN MONOAMINE OXIDASE 940 1427 - -
Acco05g2953 2010 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1518 1602 IPR035441 -
Acco05g2953 2010 SUPERFAMILY FAD-linked reductases, C-terminal domain 1258 1369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2953 Acco-ChrAcco05 44183402 44193128 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Acco05g2953 Amino_oxidase 7.6e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2953 05 44183402 44193128 Acco05g2953 05 44183402 44193128 ECH