Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2944 ATGGCTGGCTTCTTCTCTCTAGGCCCACAGAACAAACAAGAAGAAGAGAAACAAGATAACAACAACAGTAACAGCCTTTTCTTGTTCAGGGACGAGGAGATCTACAGCAGAGGATTCGAGATATGGCCACAGTCCTATCAGCCGCATCACAGCTTGAACAACTTGTACTCGTTTGGGGCGGGTCCTAGTCGCAGAAACTCCTCCAACGACGACGTCGTTTCTGACGACTCTACGAGGTTCGGATTCACGGTCATGAGGTCGGGAGGTTTGGGAGGAGGCATGAACTGTCAGGATTGTGGGAACCAAGCCAAGAAGGACTGTGCACATCTCAGATGCAGAACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCAAACCCACGTCAGGAGTACTTGGGTTCCCGCCGCTAAACGCCGTGAACGACAGCAACAACTCGCCGCTTTGCAGCAGCAGGACCAACAATTTAGGGGAGATCATTCGAAACGACACCGAGAAAATCAAGCTTCGGGCTCTCTTGCCTGCGCTCCGTTAATGCCAATGGCCACAACAGGGTTGGAACTGGGACAATTCCCACCGGAGGTGAACTCTTCGGCGGTGTTTCGGTGTGTGAAAGTAAGCGCGATGGACAGCCCAGAGGACCAGTACGCGTATCAAACGGCTGTGAACATCGGAGGTCACTTTTTCAAGGGAATCCTATATGACCAAGGTCCTGAAGGTGCTTACACCATTGGTGGCGAGAGCTCCTCCGGTGGCGGCGCTGAAGCTCAACAATTAAATCTCGTAACCGCCTCGACCACCGCTACGAACACGTCGACAAGCACCACCGCCAACCCATTTGATCCATCTTCACTATACCCGGCTCCGCTCAATGCCTTCATGGCTGGTACGCAATTCTTCCAACCTCCAAGGTCCTAA 912 0.5274 MAGFFSLGPQNKQEEEKQDNNNSNSLFLFRDEEIYSRGFEIWPQSYQPHHSLNNLYSFGAGPSRRNSSNDDVVSDDSTRFGFTVMRSGGLGGGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVRSTWVPAAKRRERQQQLAALQQQDQQFRGDHSKRHRENQASGSLACAPLMPMATTGLELGQFPPEVNSSAVFRCVKVSAMDSPEDQYAYQTAVNIGGHFFKGILYDQGPEGAYTIGGESSSGGGAEAQQLNLVTASTTATNTSTSTTANPFDPSSLYPAPLNAFMAGTQFFQPPRS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2944 303 MobiDBLite consensus disorder prediction 140 170 - -
Acco05g2944 303 MobiDBLite consensus disorder prediction 1 23 - -
Acco05g2944 303 NCBIfam putative zinc finger domain, LRP1 type 95 137 IPR006510 -
Acco05g2944 303 Pfam Domain of unknown function (DUF702) 93 237 - -
Acco05g2944 303 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 289 IPR007818 GO:0003700|GO:0006355
Acco05g2944 303 NCBIfam LRP1 C-terminal domain 188 236 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2944 Acco-ChrAcco05 44093897 44095272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2944 1 303 C2H2 Transcription Factor Family AT1G75520 46.849 7.64e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco05g2944 DUF702 2e-64 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2944 05 44093897 44095272 Acco10g1581 10 29380751 29382364 CCT