Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2939 ATGTTTGTGAGCTTCCGATATCAAAAAGAAAGAAGAAGAAGAGGGAGGCTACCAACAGTTGACGTTACGTCTTTTAAGACTCCTCATGGGGCCCCGCTCCCCTACTCCTTGTATATTTATATCCCTGCTCTCTCCCTCCTCCTCTTCACCTCTTTCTTCTTCACTATCTCTGATTCCGCCCTGTCATCAATGGCTGAATCATCCTCCGCCGCCCCCAAGAGAATGTGGTGCTCCGTCCCGGAGCGCCTCCAGCTGCATGGTGCCATGTTGGCCTTGCAGTTCGGTTACGCCGGCTTCCACGTCGTCTCTAGAGCTGCCCTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTACCGCAACATCATCGCTCTCCTTCTCCTCCTCCCCTTCGCTTACTTCCTTGAAAAGAAGGATAGACCTGGGCTTACTCTTAACTTTATTCTACAGTTCTTTCTTCTGGCTCTTGTCGGGATTACAGCGAACCAAGGATTCTACTTACTTGGGCTGGACAACACGTCGCCGACCTTCGCATCCGCTATCCAGAACTCAGTCCCGGCCATTACTTTTCTGATGGCAGCCATACTGAGGATAGAGCAAGTGAGGCTGAACCGAAAAGACGGCGTGGCCAAGGTGATCGGAACCTTATTCTGTGTTGCCGGCGCCACCGTGATCACACTATACAAAGGTCCCACCATATACAGCCCATCTCCGCCACTACACATGAGTAGCGCCACATCCACATTAACGCCACTATTTCCCTCACTGGGAGACGCAAAGGGTAAAAACTGGACCCTGGGCTGTATCTTCCTCATCGGACACTGCTTGTCGTGGTCTGGCTGGCTAGTCCTGCAGGCACCACTTCTCAAGAAGTACCCCGCTCGCCTTTCTGTCACATCTTTCACTTGCTTCTTCGGACTCATTCAGTTCCTCGTTATTGCTCTCATCTTCGAAAGAGACTCCCAGGCTTGGGTTTTTCAGTCTGGTGGAGAAGTTTTCACCATCTTATATGCGGGAGTGGTAGCATCAGGGATAGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCAGTGTTCGTGGCGGTGTACCAGCCAGTTCAAACTCTCGTTGTCGCTATTATGGCTTCCCTCGCTTTAGGCGAAGAGTTCTATTTGGGCGGGATCATAGGGGCAATCATGATCGTTGTGGGGTTATACTTGGTGCTGTGGGGTAAAAGCGAAGAAAAGAAGTTTGCAATGGAACAGCTTGCGATTGCGGAGCACGGCGGCGCCACCAGGGCAGCAAACCGCGCCAAGGCCTCACTTACTCAACCACTTCTTCCTTCATCAACGGAAAACGCCGTCTGA 1353 0.5174 MFVSFRYQKERRRRGRLPTVDVTSFKTPHGAPLPYSLYIYIPALSLLLFTSFFFTISDSALSSMAESSSAAPKRMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKDRPGLTLNFILQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGVAKVIGTLFCVAGATVITLYKGPTIYSPSPPLHMSSATSTLTPLFPSLGDAKGKNWTLGCIFLIGHCLSWSGWLVLQAPLLKKYPARLSVTSFTCFFGLIQFLVIALIFERDSQAWVFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAIMIVVGLYLVLWGKSEEKKFAMEQLAIAEHGGATRAANRAKASLTQPLLPSSTENAV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2939 450 Pfam EamA-like transporter family 90 226 IPR000620 GO:0016020
Acco05g2939 450 Pfam EamA-like transporter family 266 404 IPR000620 GO:0016020
Acco05g2939 450 PANTHER WAT1-RELATED PROTEIN 87 415 IPR030184 GO:0016020|GO:0022857
Acco05g2939 450 SUPERFAMILY Multidrug resistance efflux transporter EmrE 119 229 - -
Acco05g2939 450 SUPERFAMILY Multidrug resistance efflux transporter EmrE 307 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2939 Acco-ChrAcco05 44044378 44047273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2939 64 448 Nodulin-like Gene Family AT1G75500 74.936 0.0 589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2939 05 44044378 44047273 Acco05g2939 05 44044378 44047273 ECH