Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2929 ATGTATCCGAACCAATCTTTTTCCTCTGGGTCCTACGCGGAGATGATGTCTGGGAATTCTCTTCTACCTCATAACTTTACAGAAACTGTAGGAAGCCAAAATGAAGTGAAGTTCATCACAGCCGTTGGTGACACTGCGGCCATGCAATTCATTGATGGGCATTCCAACACTGCAACAGGTGATCCATCCGCCAACAACTCTTTCACAAGGCCGCCATTGGGGCTCGTTGACAGTGAACAGAACATACAGAGCCAGGGCTTATCTCTTAGCCTTGGCACACTCATGCCTGTCCCTCCCTTCCAATACCACTATCCCTCCACTGGCTTTTCGTCTCTTATGGCTCAAAGTATTCCTAACTTTAAGGGCACTGTTTCTCTTAAAGATGACGAGGCAAATGCTGAATGCATGGCACCTATGTCTTCAGGAGGTTTCAACAACTCCTTCCAGAAGGAGGCTTTGTACAATCCACATCCCTCACTCTATCCCAAGGAAGTCACCAATGATCCGTCATGTCTGCATGGGACACAAGGTTTTTCAAACGCTGCCTTAAACTCTCAATACCTTAAAGCAGCACAGGAATTGCTTGATGAAATAGTTAATGTACGAAAGGCTTTAAAGCAGCCTGGACTGGAAAAGCAAAAGGGTTCCCGTGACATTGGATTAGATGGCTCCAAAGAGTCCGAGGAAAAGTCTACCAGTCAGTCCGTGCAGAACCAGGACCCCAATGCTTCATCTGCCAATGCATCGTGTGAATTGTCACCCGCAGAACGGCAGAGTTTGTTGGATAAGAAGGCAAAGCTTTTGTCCATGTTAGATGAGGTAGATAAAAGATACCGGCAGTATTGCCATCAGATGCAAATGGTGGTATCATATTTTGATATGGTTGCTGGTTGTGGGGCGGCTGAACCATATACCGCTCTTGCTTTGCGAACAATTTCTCGCCATTTTCGTTGTTTGCGTGATGCAATTAGTGGCCAAATTCAAGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATACCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTGATGCGCCAAGCTTGGAGGCCCCAGAGGGGACTTCCTGAAAGTTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCACTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCTGAGATGGCAAGCTGCAATCTCTTATCTGAAAGTACTCCCCAAGCTCCAAGAGATAATAAAGGTGAAGAGTCGCAGGACAATGTAAAAGCTGTTACTAATGTCCAACAGGGGCAACTTCATGAGTTGAAGCTTGACCATAGCTCTGCTACAGAATTTGATACTGCCCATGGAGAAGCTGTCATGCGTTCTGGAATTATGAAATTGCTGGGTGATCAAAGGCCTAATATGAACAATACCCTTTATTCGAGTGGACCTTTGCCAGCCAACCACAACGGTGATGGCTGCTTAATGCCTTCTGATCCAGCCTCATACGATATGTCAGAGTTTGGAAGTTTTCCGGTGGGTGGCCACGTGTCTCTTGCATTGGAGTTGCGCAACTGTGAAACCGAGGAATTCGCCACATCTGAGAATGGTTTCAACAAAGAGCATAACCAGACGTTAGATTCTTCCCCGGAAAATGATTTGATTGATTATCATTTCACAGATTCAGGAAAGAAACAAAACAGGTTCAGTAATCCTCATCTATTGCATGAGTTTGTGGTCTAG 1863 0.4622 MYPNQSFSSGSYAEMMSGNSLLPHNFTETVGSQNEVKFITAVGDTAAMQFIDGHSNTATGDPSANNSFTRPPLGLVDSEQNIQSQGLSLSLGTLMPVPPFQYHYPSTGFSSLMAQSIPNFKGTVSLKDDEANAECMAPMSSGGFNNSFQKEALYNPHPSLYPKEVTNDPSCLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKALKQPGLEKQKGSRDIGLDGSKESEEKSTSQSVQNQDPNASSANASCELSPAERQSLLDKKAKLLSMLDEVDKRYRQYCHQMQMVVSYFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLLSESTPQAPRDNKGEESQDNVKAVTNVQQGQLHELKLDHSSATEFDTAHGEAVMRSGIMKLLGDQRPNMNNTLYSSGPLPANHNGDGCLMPSDPASYDMSEFGSFPVGGHVSLALELRNCETEEFATSENGFNKEHNQTLDSSPENDLIDYHFTDSGKKQNRFSNPHLLHEFVV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2929 620 CDD homeodomain 366 427 IPR001356 GO:0003677
Acco05g2929 620 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Acco05g2929 620 MobiDBLite consensus disorder prediction 230 251 - -
Acco05g2929 620 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 108 456 - -
Acco05g2929 620 Gene3D - 363 440 - -
Acco05g2929 620 SUPERFAMILY Homeodomain-like 367 434 IPR009057 -
Acco05g2929 620 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Acco05g2929 620 MobiDBLite consensus disorder prediction 209 251 - -
Acco05g2929 620 Pfam Associated with HOX 183 324 IPR006563 -
Acco05g2929 620 SMART prehox3 176 325 IPR006563 -
Acco05g2929 620 MobiDBLite consensus disorder prediction 53 75 - -
Acco05g2929 620 SMART HOX_1 366 430 IPR001356 GO:0003677
Acco05g2929 620 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2929 Acco-ChrAcco05 43984428 43986733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2929 177 619 Homeobox Transcription Factor Family AT2G16400 47.124 6.46e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco05g2929 POX 6.4e-50 No_clan