Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2924 ATGGTCACTTCATTGCATTTATCTGAAACAGTGGGTCATGCAATAATTGAAGAGGAAATTCACTATCCGGTGACAACTGATAAGGACAAGGGTGAAGGAACCAATGGTCGATCGAGGAACCCTGATTTTTTAAATTTGGGTTCAATTCGACGGGGAAGGATATTCTTGGGAATGGCGACTCCTGTTGAGCCTCCCAATGGGATCAGAAATGAAGGAAGGCATTATTACTCCATGTGGCAAACCCTGTTTGAGATTGATACAAAATATGTGCCCATTAAGCCTATCGGTCGAGGAGCGTATGGAATTGTGTGCTCTTCTGTCAACCGAGAAACCAATGAAAAAGTTGCCATTAAGAAGATACAGAATGCTTTTGAAAACCGGGTTGATGCACTAAGAACTTTGCGGGAATTGAAACTTCTTCGGCATCTCCATCATGAAAATGTGATTGCTTTGAAAGATATCATGATGCCTAATCATAGGAAAAGTTTCAAGGATGTCTACCTGGTTTATGAACTCATGGACACAGATTTGCATCAGATTATTAAGTCTTCACAAGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGATTGAAGTATCTCCATTCAGCTAACATCCTTCATCGTGACTTGAAGCCTGGGAATCTTCTAATCAATGCAAACTGTGACCTAAAAATATGTGATTTCGGGTTAGCACGCACCAGCAGCACCAAGAACCAGTTTATGACTGAGTATGTTGTCACTCGGTGGTATCGAGCACCAGAACTTCTGCTTTGCTGTGACAACTATGGGACATCTATTGATGTCTGGTCTGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTGTTTTCCCTGGTTCAGAATGTCTGAATCAGCTAAAACTAATTATCAACATTCTTGGCAGCCAAAGGGAGGAGGATCTTGAATTCATTGATAATCCTAAGGCAAAGAGGTACATCAAATCACTTCATTATTCTCCAGGAATGCCATTTTCCCGGGTTTACCCAAACGCCCATCCATTGGCCATTGATCTACTACAGAAGATGCTTGTTTTTGACCCATCAAAGAGGATTAGTGTTGCAGAAGCACTTCAACACCCTTATATGTCCCCTTTGTATGATCCTAACATCAACCCTCCAGCCGTTGTTCCTATTGATCTTGACATGGAGGAAGATTTGGGGGAAGAGATGATACGGGAAATGATGTGGAAGGAAATGCTTCATTACCATCCTGAAGCTGCTACAGAAAACGCAGTGGTTTGCTTATGA 1290 0.4217 MVTSLHLSETVGHAIIEEEIHYPVTTDKDKGEGTNGRSRNPDFLNLGSIRRGRIFLGMATPVEPPNGIRNEGRHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPNHRKSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTSSTKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPVFPGSECLNQLKLIINILGSQREEDLEFIDNPKAKRYIKSLHYSPGMPFSRVYPNAHPLAIDLLQKMLVFDPSKRISVAEALQHPYMSPLYDPNINPPAVVPIDLDMEEDLGEEMIREMMWKEMLHYHPEAATENAVVCL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2924 429 Gene3D Phosphorylase Kinase; domain 1 76 412 - -
Acco05g2924 429 Pfam Protein kinase domain 90 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2924 429 FunFam Mitogen-activated protein kinase 75 183 - -
Acco05g2924 429 FunFam Mitogen-activated protein kinase 173 402 - -
Acco05g2924 429 CDD STKc_TEY_MAPK 83 418 - -
Acco05g2924 429 ProSitePatterns MAP kinase signature. 124 227 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco05g2924 429 ProSitePatterns Protein kinases ATP-binding region signature. 95 119 IPR017441 GO:0005524
Acco05g2924 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Acco05g2924 429 MobiDBLite consensus disorder prediction 22 36 - -
Acco05g2924 429 Gene3D Transferase(Phosphotransferase) domain 1 173 402 - -
Acco05g2924 429 SMART serkin_6 89 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2924 429 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 88 397 - -
Acco05g2924 429 ProSiteProfiles Protein kinase domain profile. 89 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2924 429 SUPERFAMILY Protein kinase-like (PK-like) 81 383 IPR011009 -
Acco05g2924 429 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2924 Acco-ChrAcco05 43957454 43962186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2924 58 425 MAP Kinase Gene Family AT1G10210 87.500 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco05g2924 Pkinase 1e-71 CL0016