Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2909 ATGGGTTGGACCAGAGAAGAGAACAGAAGATTTGAAGATGCACTTGCAGTGTATGGGCCGGAAGACCCAAACAGGTGGCAACATGTGGCGAACGCGGTGGCCGGAAAATCGGCACAAGAAGTGCAAAGGCACTATGAGATCCTGATGGAGGACGTGGAACGAATTGAGCGTGATCAAGTCCCTTTGCCAAGATATGTTCACTCCAGGCGAGCTGCCCAAGACCCCTGCAGGATGATGAGGAATCTAAATCTTCGTTGA 258 0.5116 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVAGKSAQEVQRHYEILMEDVERIERDQVPLPRYVHSRRAAQDPCRMMRNLNLR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2909 85 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Acco05g2909 85 CDD SANT 3 45 IPR001005 -
Acco05g2909 85 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Acco05g2909 85 Gene3D - 1 62 - -
Acco05g2909 85 SMART sant 3 51 IPR001005 -
Acco05g2909 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Acco05g2909 85 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Acco05g2909 85 FunFam Transcription factor SRM1 1 62 - -
Acco05g2909 85 Coils Coil 38 58 - -
Acco05g2909 85 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Acco05g2909 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 73 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2909 Acco-ChrAcco05 43835407 43836221 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco05g2909 Myb_DNA-binding 9e-07 CL0123