Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2900 ATGGCGTCAAGCTCTACGAGTGATTATTGGACGAGGAAGCAGAACAAAAGGTTCGAGAATGCTTTGGCCATGTACGGGGAGGAGAGTCCAGATCGATGGAAGAAGCTGGCAAGGGCGGTGGGAGGAGGAAAAACAGAGGAAGAAGTGAAGAGGCATTATGAGAAGCTGGTGCATGACCTCAGGCAGATTGAGGAAGGTCGAGTGCCCTTGCCCAATTACATAATGCCCACCTGTATACCCTTCAATTGCATTATGGATGAACACCAATGAATGCAGGCTTTGAAACTGAAGTGA 294 0.4864 MASSSTSDYWTRKQNKRFENALAMYGEESPDRWKKLARAVGGGKTEEEVKRHYEKLVHDLRQIEEGRVPLPNYIMPTCIPFNCIMDEHQXMQALKLK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2900 97 ProSiteProfiles Myb-like domain profile. 10 57 IPR001005 -
Acco05g2900 97 Gene3D - 1 70 - -
Acco05g2900 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 73 IPR044636 GO:0003700
Acco05g2900 97 SMART sant 6 59 IPR001005 -
Acco05g2900 97 CDD SANT 10 57 IPR001005 -
Acco05g2900 97 SUPERFAMILY Homeodomain-like 8 64 IPR009057 -
Acco05g2900 97 FunFam Transcription factor SRM1 2 70 - -
Acco05g2900 97 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2900 Acco-ChrAcco05 43769377 43769772 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco05g2900 Myb_DNA-binding 2.3e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2900 05 43769377 43769772 Acco05g2900 05 43769377 43769772 ECH