Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2898 ATGAATTTACTGAGAGTAATACTGAAGGCAGCTTTAGTCTTCTTGCTCTTTATTCAGTTTGGCGTAGCTCGAGAAATATCTTCGAGCTTCCGAATCGAACGGCTCGCGCTGCGTAAGCTTCGCTCATCGTTGGGGATTCGTAGCAAGTACTGGCCCATAAAAGCAGAACCGTGCAGGAACTGGACCGGGGTTCGGTGCCAGAGCGGGCGGGTGGTTGGGATAAACTTGTCCGGTTTGAGACGAACCCGATTCCGGCGTCTTCGTCCCAGTTTCGCAGTGGATTCTCTTGCTAATTTCACACTCTTGGAGTCATTCGAAGCTTCTGGGTTTTTACTCAATGGCTCTATTCCCGACTGGTTCGGACAGCGCCTGACGACTCTCCAAAAGCTCGATCTAAGTTCTTGCTCACTCACGGGTCTCATTCCTCCACTGCTTGGTAATTTGAGTTCGCTGAAGGTTCTGATTCTGGCAGGTAATAGTCTCACTGGGAGAATTTCTTCCACATTGGGAGAATTATCCAGTTTATCGGTTTTGAATCTCTCAGGAAATTCGCTCACTGGATTAATGCCCAACTCTTTCTCGTCTCTGATCAATCTCAGAGCCCTTGACCTTTCTTATAATTTTTTATCTGGTTCCGTTCCAGCCTATCTTGGTAACCTTAATAGGCTCGAGTTTTTGAATCTTTCCGATAATGACTTTACCGCCTCAATACCTTACCAATTGAGTAATCTTTCTCAGTTAGTTCAGCTTGATCTAAGCAAGAATGCTTTTGATGGCGTTCTTCCTCCCGCATTGTGGTCAATGAGCCACCTGTCCATTCTTGATGTATCTAGCAACAACCTTACTGGTACCCTGCCGAAACTTGGCCCAAATGTTAATTCTACCGGTGCTATCTTCAACCTTTCAAACAATATATTCTATGGATATCTTAATACTTCATTTAAGAAATTTAGGATCATTGATTTGTCCAGTAATTATTTCCAAGGCAAGGTGCCTGATCATGGCTTAAGCAATATTACTCTTGATACAAATTGCCTAATGCCGAGTCCGAACCAAAGGAGTTCCGGCGATTGTACACTGTTTTATGCTCAGAGAAGCCTAATTTTTGTTGGTGCTCAAGAACCAACCACGTCGCCTTTGGCTAAAGCAGTGTCCAGAAACAACAAACGAGTGATATTCATTTTGGCTGGCACATTTGGTGGGCTTGTGTTTATTGTCATTCTAGCATCAGTCCTAGTGCTGCTTCTAGGTAAATGTGGTAATAACACTGAAACTCAGAAGAGGGCAGTAAATGAAAGGGCCGTTCAACAAGGGGAAAGTTCTATGCCTCCTAAGAATCCTATGTTAGACAGCAGCATGGGAGAATCATTTGGTTATGAACAAGTGCTCCATCTGACTGGAAATTTTGCAGACGTTAATATCGTCAAGCATGGTCATTCCGGGGACCTTTTCAGGGGAATCCTAGATGGTGAAGTAAGTGTGGTTGTGAAAAGGGTGGATTTGAACCTAGTCAAGAGAGAATCATTCATGTTGGAATTAGAACTGTTAAGCAAGGCTTCGCATGCAAGATTGGTGCCACTACTGGGGCTCTGCTTGGAGAATGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTACTTGCTTGCACAGAGTTAGTGGCTCAGACGATAAAGAACAATCCTTGGATTGGATCACCAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTACATTACCTGCATGATTCCAGCCCTCCCCTTGTCCATAGAGATGTCCAAGCAAGCAGTATACTTCTGGATGATAAATTTGAAGTTAGACTTGGAAGTTTGAGCGAGGTCACTGCCCAAGGAGATGTTAACCAGAGTGTCATCGCAAGGTTATTTCGCAAGTCACAATCTTTTGATCAAAACAATCCTGGTTCATCACCTGCAACGTGTGCTTATGACGTATACTGTTTTGGGAAGGTTCTACTTGAGCTTGTTACCGGTAAGCTTGGTATTAGCAAGACAGATGATGGCAACACAAGAGAGTGGATAGAGCAAACATTGTCATACATAAGCATAAATGACAAGGAACAGATGACTAAAATAGTAGACCCATCTCTTATAGTGGATGAGGACCTATTGGAAGAGGTGTGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCTAGGCCCTTTAAACGCCCTCCAATAGGGTATGTCCTAAAAGCACTGGAAAATCCATTGAAGATAGTGAGAGAAGAATATAATAGCAGCTCAGCTAGGTTGAGAACAACTTCATCAAGGAGATCTTGGAGCACAGCATTCTTTGGGAGCTGGAGACAGAGCTCATCGGAGAGTGCTACTGCAACTGCGAGCAGAGAGGTTATAACTGCCAGTGGCTTTAAGCAAACAGGAAGAGTAGGGTCTCAGGGTAGTGGTGGCAATGATCACTCTTCTTCCCACAAGAGGTTGTCCAGTGAAGTTTTCCCTGAACCATTGGAAATCCAAGAGGTGGAAGCTGGAGACGCCAGATGA 2541 0.442 MNLLRVILKAALVFLLFIQFGVAREISSSFRIERLALRKLRSSLGIRSKYWPIKAEPCRNWTGVRCQSGRVVGINLSGLRRTRFRRLRPSFAVDSLANFTLLESFEASGFLLNGSIPDWFGQRLTTLQKLDLSSCSLTGLIPPLLGNLSSLKVLILAGNSLTGRISSTLGELSSLSVLNLSGNSLTGLMPNSFSSLINLRALDLSYNFLSGSVPAYLGNLNRLEFLNLSDNDFTASIPYQLSNLSQLVQLDLSKNAFDGVLPPALWSMSHLSILDVSSNNLTGTLPKLGPNVNSTGAIFNLSNNIFYGYLNTSFKKFRIIDLSSNYFQGKVPDHGLSNITLDTNCLMPSPNQRSSGDCTLFYAQRSLIFVGAQEPTTSPLAKAVSRNNKRVIFILAGTFGGLVFIVILASVLVLLLGKCGNNTETQKRAVNERAVQQGESSMPPKNPMLDSSMGESFGYEQVLHLTGNFADVNIVKHGHSGDLFRGILDGEVSVVVKRVDLNLVKRESFMLELELLSKASHARLVPLLGLCLENENEKFLVYKYMPNRDLATCLHRVSGSDDKEQSLDWITRLKIAIGAAEGLHYLHDSSPPLVHRDVQASSILLDDKFEVRLGSLSEVTAQGDVNQSVIARLFRKSQSFDQNNPGSSPATCAYDVYCFGKVLLELVTGKLGISKTDDGNTREWIEQTLSYISINDKEQMTKIVDPSLIVDEDLLEEVWAMAIVARSCLNPRPFKRPPIGYVLKALENPLKIVREEYNSSSARLRTTSSRRSWSTAFFGSWRQSSSESATATASREVITASGFKQTGRVGSQGSGGNDHSSSHKRLSSEVFPEPLEIQEVEAGDAR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2898 846 ProSiteProfiles cAMP/cGMP binding motif profile. 474 523 IPR000595 -
Acco05g2898 846 SUPERFAMILY Protein kinase-like (PK-like) 442 746 IPR011009 -
Acco05g2898 846 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Acco05g2898 846 FunFam Predicted protein 440 544 - -
Acco05g2898 846 PANTHER OS05G0588300 PROTEIN 217 749 - -
Acco05g2898 846 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 214 310 - -
Acco05g2898 846 Pfam Protein tyrosine and serine/threonine kinase 476 687 IPR001245 GO:0004672|GO:0006468
Acco05g2898 846 ProSiteProfiles Protein kinase domain profile. 469 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2898 846 Pfam Leucine Rich Repeat 127 148 IPR001611 GO:0005515
Acco05g2898 846 Gene3D Phosphorylase Kinase; domain 1 429 544 - -
Acco05g2898 846 MobiDBLite consensus disorder prediction 800 821 - -
Acco05g2898 846 MobiDBLite consensus disorder prediction 800 846 - -
Acco05g2898 846 SUPERFAMILY L domain-like 44 333 - -
Acco05g2898 846 Gene3D Ribonuclease Inhibitor 31 191 IPR032675 -
Acco05g2898 846 SMART LRR_typ_2 244 267 IPR003591 -
Acco05g2898 846 SMART LRR_typ_2 196 220 IPR003591 -
Acco05g2898 846 SMART LRR_typ_2 172 195 IPR003591 -
Acco05g2898 846 SMART LRR_typ_2 268 291 IPR003591 -
Acco05g2898 846 SMART LRR_typ_2 124 147 IPR003591 -
Acco05g2898 846 SMART LRR_typ_2 148 171 IPR003591 -
Acco05g2898 846 Gene3D Transferase(Phosphotransferase) domain 1 545 769 - -
Acco05g2898 846 FunFam Putative LRR receptor-like serine/threonine-protein kinase 545 767 - -
Acco05g2898 846 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 122 213 - -
Acco05g2898 846 Gene3D Ribonuclease Inhibitor 192 360 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2898 Acco-ChrAcco05 43759234 43762248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2898 33 638 Miscellaneous Gene Families AT2G16250 46.757 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Acco05g2898 PK_Tyr_Ser-Thr 6.6e-21 CL0016