Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2881 ATGGAAACAGGAAATGATGGCACAACCCTCGTGCCACTTTTCTTTCTTAATTTCCCCCTCTCGGCACGGGACTCTTCCTTCACTCAAATCATCATGTTCAAGTCCCAGAACAAAGGCAAACAAGCCCAGGAAAGCAGCGACGTTTACACTGCATCAAAGATTGAGGAGCTCAAGGCTGAGATTGGGCCCTTATCTGGACGCAGCCTAAAGTACTGCACTGATGGTTGTTTGAAGGGCTATCTGGAAGTTAACAATTGGAATGTGAAAAAAGCCAAGAAGATGTTTGGACACACACTAGAGTGGAGATTAACCTACAAGCCTGAAGCAATCCGCTGGCATGAGGTTGTAAAGGAAGGACAGAGAGGGATAATCTACAGAGCAAGTTTTCATGACCGAGAGGGAAGGACAGTTCTCATATTCAGAACTGGAATTCCATTTCCGAAAATAATTTCAATTGAGGATGTGATAAGGTTCGATGTGTATCTTCTGGAAAATGCGGTGCTTAACTTCGAGCAAGGTCAAGACCAAATGGCGTGGCTGATAGATTTCACTGGATGGTCACTTACCAATATGTCCATAAGAATAGCAAGAGAGTTCATTAACATTCTACAAAAGCACTATCCAGATAGGGTTGCCGTAGCATTTCTTTACAATCCTCCTCGGGCTTTTGAGACTCTTTTAAAGATAATCAAGTACTTAGTGGATAGCAAAACATTTGGGAAGGCCAAGTTCGTGTACCCCAAAGAGAAAGAAAGCATGGATCTTATGAAGTCGTACTTTGATGAAGAAAATCTTCCCATAGAATTTGGGGGGAAAGCTACAATGAAGTATGACCATGAGGAATACTCTAGATTGATGACTCAGGATGATTTGAAATCCGCTGCGTTTTGGGGAGCTGATGACAGTCTATCAAGCCACGTTGAAGCTGGCCAATCCAGTGCCTAA 945 0.4317 METGNDGTTLVPLFFLNFPLSARDSSFTQIIMFKSQNKGKQAQESSDVYTASKIEELKAEIGPLSGRSLKYCTDGCLKGYLEVNNWNVKKAKKMFGHTLEWRLTYKPEAIRWHEVVKEGQRGIIYRASFHDREGRTVLIFRTGIPFPKIISIEDVIRFDVYLLENAVLNFEQGQDQMAWLIDFTGWSLTNMSIRIAREFINILQKHYPDRVAVAFLYNPPRAFETLLKIIKYLVDSKTFGKAKFVYPKEKESMDLMKSYFDEENLPIEFGGKATMKYDHEEYSRLMTQDDLKSAAFWGADDSLSSHVEAGQSSA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2881 314 SUPERFAMILY CRAL/TRIO domain 113 287 IPR036865 -
Acco05g2881 314 CDD SEC14 130 272 IPR001251 -
Acco05g2881 314 Pfam CRAL/TRIO domain 130 271 IPR001251 -
Acco05g2881 314 SUPERFAMILY CRAL/TRIO N-terminal domain 49 114 IPR036273 -
Acco05g2881 314 SMART sec14_4 118 274 IPR001251 -
Acco05g2881 314 Gene3D - 22 300 IPR036865 -
Acco05g2881 314 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 112 277 IPR001251 -
Acco05g2881 314 PANTHER GH16843P 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2881 Acco-ChrAcco05 43681545 43686251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2881 71 266 Acyl Lipid Metabolism Gene Families AT1G55840 26.190 1.40e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2881 05 43681545 43686251 Acco05g2881 05 43681545 43686251 ECH