Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2852 ATGAAGCGAAGAGAGCAACCACAGCCTCCTTGTCTAACAGACGCGGAGTCAGATAGATTAAGTTGCTTACCAGGTCATGTTATTGATCAGATTCTTTCACATTTGTCAATTCGGGAAGCAGTGAGGACTAGTGTTTTATCCAGCAAATGGAGGTACAAATGGTCTACTCTACCAAATCTTGTGTTTGATAGTCAGTGTCTTCCCATATCTTCCCAAGATCATTCAATTATCAAGAACAAGCTTGTGAGAATTATTGATCATGTGCTTTTGCTTCACTCTGGTGCAATAAACAAGTTTAAGCTCTCCCATCTTGATCTAATTGGTGTGATTGACATTGATCGTTGGACCCTTTATCTAACCAGAAGATCTATCAAAGAGCTTGTGCTGGAAATCTGGAAAGGGCATCACTACAAGATACCGTCTTGTTTATTTTCTTGCCAAAGTTTAATTCATTTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACATTTATAGGCTTCAGGAACTTGAATACTCTTGATCTACAGAATGTTACTATGGATCAAGATGTGTTTGAAAACTTGATATCTAACTGCCCACTGCTTGAACGTCTAACACTGATGAACTTTGATGGCTTCACTCATCTCAACATTGATGCACCGAATCTTCAGTTTTTTGACATTGGAGGCAAATTTGAGGATGTTAGATTTGAAAGCACTTTCCATTTAGCAGTTGTATCCGTTGGTTTGTATTTGAACCTTGAAAACGAGAAAAATAGATGGCAAGGAAGTTCTAGCAATTTGCTCAAGTTCTTTGTTCATTTACCTCATGTTAGAAGGTTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGAGTTGTGCCAGTAAAGCTTCCTAGACCATGCGTAGATTTAACTTATCTTTCCATACGCATCAATTTCAATGATTCCAAGGAAATTTCAGCTGCTTTGTGCCTTTTAAGGAGTTCTCCGAATCTCCAAGAACTGGAGGTGTTGGCTCGCACTGAGGAGCAAGAGAGTACGCTGGGAGCACAGGAATACTGTTGGGAGGATGAGTATTGGAATTGCCCAGTGATGCAGCTGCAATATGTTAGGATAGACGGTATCTCTGGCATCAAACCCGAACTAGGTTTTATCAGCTTTCTGCTTTTATATTCTCCCCTTCTGGAACGGATGACTGTGAAGCCTGCTTCTTCAAATGGAGGATCAGAGTTGATGAAAGAATTATTGCGGTTCAGGAGAGCATCAGGGCGAGCTGAAATTATATACCTGGATCCTTGA 1290 0.4016 MKRREQPQPPCLTDAESDRLSCLPGHVIDQILSHLSIREAVRTSVLSSKWRYKWSTLPNLVFDSQCLPISSQDHSIIKNKLVRIIDHVLLLHSGAINKFKLSHLDLIGVIDIDRWTLYLTRRSIKELVLEIWKGHHYKIPSCLFSCQSLIHLELFNCWLKPPSTFIGFRNLNTLDLQNVTMDQDVFENLISNCPLLERLTLMNFDGFTHLNIDAPNLQFFDIGGKFEDVRFESTFHLAVVSVGLYLNLENEKNRWQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPVKLPRPCVDLTYLSIRINFNDSKEISAALCLLRSSPNLQELEVLARTEEQESTLGAQEYCWEDEYWNCPVMQLQYVRIDGISGIKPELGFISFLLLYSPLLERMTVKPASSNGGSELMKELLRFRRASGRAEIIYLDP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2852 429 Gene3D Ribonuclease Inhibitor 91 378 IPR032675 -
Acco05g2852 429 SUPERFAMILY RNI-like 99 333 - -
Acco05g2852 429 SMART 9598neu4hmm 358 427 IPR006566 -
Acco05g2852 429 PANTHER F-BOX PROTEIN-LIKE 18 401 - -
Acco05g2852 429 SUPERFAMILY F-box domain 17 63 IPR036047 GO:0005515
Acco05g2852 429 ProSiteProfiles F-box domain profile. 17 51 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2852 Acco-ChrAcco05 43504835 43508398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2852 1 237 EF-hand Containing Proteins AT5G41840 25.483 4.04e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2852 05 43504835 43508398 Acco05g2852 05 43504835 43508398 ECH