Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2840 ATGATCATAAAGCACTCGCTTCTCTTCCTTTTGGTTCTGTTTCTCCTTCCCCTGATCACCGCCCAATCGAACCGCCCTCACTGCCGACAAACATGCCCTCCGCAAAACTCCCTCCCAAACTTCCCTCAAGTATTCGGCTTCTCTTCCGGCTGCGCCATCCGACTCAACTGCACGCCTTCCGGCAGAATCCTCATCGGAGATTACCCCGTCTATTCTATTAACTCCGACGCCATAATCGTTAGCGTCAAGTCCCAATGCAACCGTCCGTTTCGCACCTTCCATCGGCTCTTTGGCCGTAGTTACGCGCCCACGTCGCGAAACGCCATCCTTTTGCAGAATTGCAGTGAAACGGCGGTCTCCCCTTGCGTCTTACCGGCAACCATGGTGCAGACTCACTTCGAGTCTGAAAACTGCAGCTCCGGCGGCGGCAATTTGAGCTGCTATTACGAAAATTCTACCGTTGATTTTATGAATCTCCAGAATTTAACGAACAAACACTGTCAATACCTTATGTCGTCGATAGCGGCAGAGGAATTAAGGAACAGTTCCGATATCAGTGCGGCGACAGCGGTGTCGTTGGAGGTTGAGACGATTGAGCTCGGGTGGTGGCTGGAAGGAGAGTGCCAATGTTCCAGACACGCCAACTGTACGAAACTCAAATCTCCGATTGATAAGAAGCCCGGGTATCGGTGCCGTTGCAGGGAAGGATTCACGGGCGACGGATATTTAGCCGGAAATAGTTGCCGGAAAGCCTCTTCATCCTGCAATCCAGCAAGGTACATGTCTGGCCAATGTGGAGGGACAACCAGATTTGTTGTCTTAATTGGAGGGATGTTCTTTGGAGCTTTATTAATGATCGGTTTCGGTCTAATATGTTGTTTCTTTCGTCGGCGCTCCAAATTAAGAGTCACAAAGAGCACAAAAAGGCGCTTGACTGAAGCTACCAGCAATTACAGCGTTCCTATTTATACCTACAAAGACATTGAGAGAGCCACAAATAACTTCTCAGAGAAACAGAGGCTTGGAACAGGGGCATATGGGACTGTTTACGCTGGAAAACTTAACAATGACGAATGGGTTGCCATTAAGAGGATCAAATACAGAGACACTGACAGTATCGAGAAAGTAATGAACGAGATTAAGCTCATTTCCTCTGTGAACCATCCCAATCTAGTCCGCCTTCTGGGTTGCTCCCTCGAATATGGAGAACAAATCCTTGTCTATGAGTTCATGCCCAATGGAACGTTGAACCAACATCTGTTAAGGGAGAAAGGGATGGGACTTCCATGGCCGGTTCGACTCACTATTGCTACTGAAACAGCACAAGCCATAGCATATCTCCACTCTGCCATCAATCCCCCCATTTACCACAGAGACGTCAAGTCAAGCAACATATTGTTAGACAACAATTTTAGATCCAAAGTTGCAGATTTTGGTCTTTCCAGACCTGGGATGACAGAAATATCTCACATTTCAACTGCCCCACAAGGAACGCCTGGCTATGTTGATCCACAGTACCATCAAGATTTTCACCTCTCTGATAAAAGTGACGTTTACAGTTTTGGAGTTGTTCTTGTAGAAATCATAACAGGATTGAAAGTGGTGGACTTTACTCGTCCCCAGAATGCAGTGAATTTGGCTTCTTTTGCTACGGACAGGATTGGGAAGGGGCTTTTGGATGAGATTATAGATCCATTTCTCGAAGCACATACGGATTATTGGACCCATTTCTCCGTACACAAGGTGGCCGAGCTAGCATTTCGATGCCTTGCATTCCACAGGGACATGAGGCCTTCCATGACAGAAGTTGCTGCTGAGCTTGAGCAGATAAGACTGAGCAGGTGGACAACCTTCGAAGACAGCAACCATATAGCCTCAACGGAGTTGTCTTCTTCTTCTCCTTCCTCTTATGAGAGTGAGAAACCTCTAAGTGTGAAAGAAAAGAAGGCGGAACCGGAGGGTAAAGGCATTGTCAAGTTGCAGACTGAATCTGCAGCGTTAAACTCAGTTGAAAGGGCCCAGAACTGTTCTCCGGTCTCAGTGCAAGACCCAGACTTTTGGCTGAGTGAACAAAGCTCTCCTTCATCAAATAGTTTGTTGAGTAAATCTAAATCATTCGGGTGA 2124 0.4722 MIIKHSLLFLLVLFLLPLITAQSNRPHCRQTCPPQNSLPNFPQVFGFSSGCAIRLNCTPSGRILIGDYPVYSINSDAIIVSVKSQCNRPFRTFHRLFGRSYAPTSRNAILLQNCSETAVSPCVLPATMVQTHFESENCSSGGGNLSCYYENSTVDFMNLQNLTNKHCQYLMSSIAAEELRNSSDISAATAVSLEVETIELGWWLEGECQCSRHANCTKLKSPIDKKPGYRCRCREGFTGDGYLAGNSCRKASSSCNPARYMSGQCGGTTRFVVLIGGMFFGALLMIGFGLICCFFRRRSKLRVTKSTKRRLTEATSNYSVPIYTYKDIERATNNFSEKQRLGTGAYGTVYAGKLNNDEWVAIKRIKYRDTDSIEKVMNEIKLISSVNHPNLVRLLGCSLEYGEQILVYEFMPNGTLNQHLLREKGMGLPWPVRLTIATETAQAIAYLHSAINPPIYHRDVKSSNILLDNNFRSKVADFGLSRPGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPQNAVNLASFATDRIGKGLLDEIIDPFLEAHTDYWTHFSVHKVAELAFRCLAFHRDMRPSMTEVAAELEQIRLSRWTTFEDSNHIASTELSSSSPSSYESEKPLSVKEKKAEPEGKGIVKLQTESAALNSVERAQNCSPVSVQDPDFWLSEQSSPSSNSLLSKSKSFG 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2840 707 MobiDBLite consensus disorder prediction 626 657 - -
Acco05g2840 707 FunFam Wall-associated receptor kinase-like 20 411 620 - -
Acco05g2840 707 FunFam Wall-associated receptor kinase-like 14 302 410 - -
Acco05g2840 707 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 661 IPR044652 GO:0004672
Acco05g2840 707 Gene3D Transferase(Phosphotransferase) domain 1 411 630 - -
Acco05g2840 707 MobiDBLite consensus disorder prediction 641 656 - -
Acco05g2840 707 MobiDBLite consensus disorder prediction 683 707 - -
Acco05g2840 707 SUPERFAMILY Protein kinase-like (PK-like) 311 608 IPR011009 -
Acco05g2840 707 MobiDBLite consensus disorder prediction 626 640 - -
Acco05g2840 707 Gene3D Phosphorylase Kinase; domain 1 296 410 - -
Acco05g2840 707 CDD EGF 207 242 - -
Acco05g2840 707 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2840 707 Gene3D Laminin 208 248 - -
Acco05g2840 707 FunFam Wall-associated receptor kinase-like 14 isoform A 208 243 - -
Acco05g2840 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Acco05g2840 707 ProSiteProfiles Protein kinase domain profile. 335 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2840 707 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Acco05g2840 707 SMART serkin_6 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2840 Acco-ChrAcco05 43434595 43438111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2840 1 700 Receptor kinase-like Gene Family AT2G23450 49.579 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco05g2840 Pkinase 1.3e-42 CL0016