Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2835 ATGTTTACCACATCGCATCCTGTAATTCGAAGCTTGACAAGCTTGCCGGACCTGTCCTTAAACATAAGACCACCATGTATTTCAGAATGGGAGGCCAAAGAGGTTAGGAGCAAAACACTTTACAATGATATATACTCAACCTCTGATTCTGGTAGCAGTGCTGGAAGTGACATAAGCCATGAGAATAGCTTTCTTCATCACCTTGGCCATCCTGAGCCCACGTTGAGCCTTGGCTTAGAAACCCCTAATTTGATGAATCATCCCCATCTTTTACAGGCACTCTCAAGGAACGTTAATCATCATCACTTCCACAACCACCAACCCCACATTTATGGCAGGAGCTTTAAACGAAATACAAGAGTCATTAATGGTGCCAAAAGAAGTGTTAGAGCTCCTAGAATGAGATGGACCACAACTCTACACGCCCAGTTTGTTCGTGCTGTCCAGCTCCTTGGCGGTCATGAAAGGGCTACTCCAAAGTCGGTATTAGAGTTGATTAATGTTAAGGATCTAACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTACAGAACAGTGAAGAGCACCGATAAAGGGACAGGTCATGCGCAGGCAGATATGGGTTTGATGAACCGAAGGCCGGAGAACAATGTGGATGTGCATGGAGCTTCAGGCTGTGAGGGAGCCCGTTTATCATCACCACAATCGCTCCAGAAATCCCTCAGAGCATCATGGCAATCGTCAATGGAGACAAATACAAATGACAGCGGACAAACCCCCCAAATTGATGATTTGACTCATTCTCACGATCTCAAGGCAAAGGAAACAAAGGTGGATGGAGCTAATAGAGGGCTGTGGAATTGCGTGAAGGAGAGGTTGGATTGTAGCAATTTGTCACGTTCGGATTTGATGCTTGACCTGGAATTCACACTCGGAAGACCCAGTTGGCAATACAGACTCTAA 942 0.4586 MFTTSHPVIRSLTSLPDLSLNIRPPCISEWEAKEVRSKTLYNDIYSTSDSGSSAGSDISHENSFLHHLGHPEPTLSLGLETPNLMNHPHLLQALSRNVNHHHFHNHQPHIYGRSFKRNTRVINGAKRSVRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELINVKDLTLAHVKSHLQMYRTVKSTDKGTGHAQADMGLMNRRPENNVDVHGASGCEGARLSSPQSLQKSLRASWQSSMETNTNDSGQTPQIDDLTHSHDLKAKETKVDGANRGLWNCVKERLDCSNLSRSDLMLDLEFTLGRPSWQYRL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2835 313 SUPERFAMILY Homeodomain-like 129 186 IPR009057 -
Acco05g2835 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 185 IPR006447 GO:0003677
Acco05g2835 313 MobiDBLite consensus disorder prediction 222 257 - -
Acco05g2835 313 Pfam Myb-like DNA-binding domain 133 184 IPR001005 -
Acco05g2835 313 MobiDBLite consensus disorder prediction 216 257 - -
Acco05g2835 313 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 310 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco05g2835 313 Gene3D - 131 188 - -
Acco05g2835 313 FunFam Myb family transcription factor 130 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2835 Acco-ChrAcco05 43402698 43404982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2835 1 235 G2-like Transcription Factor Family AT5G42630 48.347 2.81e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco05g2835 Myb_DNA-binding 5.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2835 05 43402698 43404982 Acco10g1671 10 30143060 30146020 CCT
Acco05g2835 05 43402698 43404982 Acco05g2835 05 43402698 43404982 ECH