Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2830 ATGCAGGTCTCGAGTTGCTTCCCGTTTATATTGTTTCTGGTTGTATTTACGTCCTTGGCAAATGCTCTTTCTAATGTTGAGGCCTCCTTTATTGCTCGTCGGCAATTGTTAACACTACGTGAGAATGAAAACTTGCCTGATAATTATGTAGAGACCTATAAAACAGAACTAACTTTTCCCAATAGTAGACTCAAGAGTGCTTATATTGCACTTCAAGCATGGAAATTGGCAATGTATTCGGACCCTTTTAAGACCACCAACAATTGGGTGGGACCAGATGTTTGTTCGTATAATGGGATTTTTTGTGCTCCCGCGTTGGACGATCCAAACACCACCGTTGTGGCCGGAATTGATCTTAATCATGCAGACATCGCAGGCTTTATTCCCGCCGAATTTGGTTTAATGACCGACCTTGCTTTAATTCACATAAACTCAAACAGGTTTTGTGGGATTCTTCCCAAGACTTTCTCCAAGTTGAGGCTTTTGTTTGAGTTGGATATCAGCAATAACCGCTTTGTTGGCCCGTTTCCGAAGTGTATTCTGCCACTTCCGGATCTTAAGTACATTGACCTTAGGTACAATAACTTTGAAGGCCAACTTCCTCCGGAGCTTTTCAACAAGCCAGCCGATGCTATATTTTTGAACAACAATCGGTTTACATCGACAATTCCTGAAAATCTCGGGAATTCTTCAGCCTCCGTGATAGTGTTTACCAACAACAACTTCCAAGGTTGTATTCCTGAAAGCATAGGTAAAATGGGAGCAACATTGAATGAGATTGTGTTTGCCAACAACAATCTCACTGGCTGCCTGCCAATGGAAATTGGAAAGCTTGCGAGTGTGACAGTTTTTGATGTGAGCAAAAATGTGTTTGGTGGCATCTTGCCCAAGTCCTATGACGGACTCAAAAGGGCAGAAGTGATTTCAATTGCCCACAACAAATTCACCGGTTTTGTCCCACAAAGCATATGTAGCTTGCCTCGCCTGATAAATTTCACATTTGTAGATAACTACTTCAATGGTGAGGAGCAAGGTTGTGCGGCTTCTTCTAGAAAGAATCTTGTGTTTGATGATGCTGGTAATTGCTTGCCAAATAAGTCAAATCAAAAGGAAACAAGTGTTTGCTCTGTTGTGACAAGTAAGCCTGTTGACTGTAGTAAGCAACAATGTGGCCATCCACCTTCAGGTTCAAAACAACAACCACCTAAATCTCATGCACCGCCACATCAAACTCCTAAAACACAGCCTCCCCAACCACCAAAAGAGGAAAGTCCTAAACCTCAACCTCCTCGACATAGCCCTAAATCTCCACCAACCCAATCTCATTCAACACCTGAACCATCTCCCGATCCTTTTGACGTCAACCCTAAACACCCACGTCGACCTGGCTACCCACCAACCCAATCTCCCTCGTCACCAACTTACTCTTCTCCGCCAACACCTGTCCATTCTACACCCTCAGCTTACTCTCCCCCACCGACTCAATCTCCCTCGCATCCGACTTACTCTACACTGACACCGCTTGTCTATTCACCACCCCCGGTCCACTCCCCACCTCCTCCACCAGCTCACTCCCCACCTCCTCCACCAGCTCACTCCCCCCCGCCTCCGATCTACTCTCCACCTCCCCCATCTCCTGTCTTTTCACCTCCACCCCCAATTCATTCTCCTCCGCCTCCTGTCTTTTCACCCCCGCCACCTGTTCATTCTCCTCCCCCTCCAGTACATTCTCCTCCGCCTCCTGTCTTTTCACCCCCGCCCCCAGTTCATTCTCCTCCCCCTCCTGTACATTCTCCTCCGCCCCCTGTCTTTTCACCTCCACCCCCCGTACATTCTCCTCCGCCTCCGGTCTTTTCACCACCACCCCCAGTTCATTCTCCTCCACCTCCGGTACGTTCTCCCCCGCCTCCTATCCATTCTCCTCCACCCCCAGTTTTCTCTCCACCGCCACCTGTCCATTCTCCTCCTCCACCTATCTCCTCTCCCCCTCCACCTACTCAATCCCCATCACTCATTCCTCCTCCCCTGTCAACACCTCCTCCAGAAGATGACATTATTCTTCCTCCAGTTTTTGGCGCTTCGTACGCATCACCACCTCCACCGATCATCTCTGGCTACTGA 2121 0.4818 MQVSSCFPFILFLVVFTSLANALSNVEASFIARRQLLTLRENENLPDNYVETYKTELTFPNSRLKSAYIALQAWKLAMYSDPFKTTNNWVGPDVCSYNGIFCAPALDDPNTTVVAGIDLNHADIAGFIPAEFGLMTDLALIHINSNRFCGILPKTFSKLRLLFELDISNNRFVGPFPKCILPLPDLKYIDLRYNNFEGQLPPELFNKPADAIFLNNNRFTSTIPENLGNSSASVIVFTNNNFQGCIPESIGKMGATLNEIVFANNNLTGCLPMEIGKLASVTVFDVSKNVFGGILPKSYDGLKRAEVISIAHNKFTGFVPQSICSLPRLINFTFVDNYFNGEEQGCAASSRKNLVFDDAGNCLPNKSNQKETSVCSVVTSKPVDCSKQQCGHPPSGSKQQPPKSHAPPHQTPKTQPPQPPKEESPKPQPPRHSPKSPPTQSHSTPEPSPDPFDVNPKHPRRPGYPPTQSPSSPTYSSPPTPVHSTPSAYSPPPTQSPSHPTYSTLTPLVYSPPPVHSPPPPPAHSPPPPPAHSPPPPIYSPPPPSPVFSPPPPIHSPPPPVFSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVHSPPPPVRSPPPPIHSPPPPVFSPPPPVHSPPPPISSPPPPTQSPSLIPPPLSTPPPEDDIILPPVFGASYASPPPPIISGY 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2830 706 Gene3D Ribonuclease Inhibitor 103 380 IPR032675 -
Acco05g2830 706 PRINTS Proline rich extensin signature 405 421 - -
Acco05g2830 706 PRINTS Proline rich extensin signature 425 437 - -
Acco05g2830 706 PRINTS Proline rich extensin signature 438 459 - -
Acco05g2830 706 PRINTS Proline rich extensin signature 466 482 - -
Acco05g2830 706 PRINTS Proline rich extensin signature 483 500 - -
Acco05g2830 706 MobiDBLite consensus disorder prediction 385 404 - -
Acco05g2830 706 MobiDBLite consensus disorder prediction 405 498 - -
Acco05g2830 706 FunFam Leucine-rich repeat extensin-like protein 1 68 229 - -
Acco05g2830 706 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 508 - -
Acco05g2830 706 SUPERFAMILY L domain-like 77 350 - -
Acco05g2830 706 MobiDBLite consensus disorder prediction 511 686 - -
Acco05g2830 706 MobiDBLite consensus disorder prediction 385 706 - -
Acco05g2830 706 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2830 Acco-ChrAcco05 43372010 43374130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2830 13 430 Trihelix Transcription Factor Family AT2G15880 58.373 2.89e-172 509