Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2798 ATGGATAAGGGGAGGGTTGTGATTTGCGAAGGTCTTGGAATTCTCGAAATGGGTAGGTTTTGGTTGGTTGGGATTTTGATTGTTTTGGGCAATGCGTGGTCCTTGGCCCAAGGGTACCCCTCGGAAGATCTGGTGGTGAGTCTCCCTGGTCAACCCAAGGTTGGGTTTAGACAGTATGCTGGGTACGTTGATGTAGATGTTAGCCATGGAAGGAGTTTGTTCTACTACTTTGTGGAGGCTGATAAGGACGCCGACCTGAAGCCTCTTACTCTCTGGCTCAATGGAGGTCCGGGATGTTCCTCCATCGGAGGAGGTGCCTTCACTGAATTGGGCCCCTTCTATCCTCAAGGTGATGGCCGTGGTCTCCGAAGAAATACAATGTCTTGGAATAGAGCATCTAACCTCTTGTTTGTGGAGTCCCCCGCCGGCGTTGGGTGGTCATACTCGAATACAACTTCAGATTATACCTGCGGAGATGCTTCCTCCGCCAATGACATGTATTTATTCATGTTGAAATGGTACGAGAAATTTCCTACATTCAGAACAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCTAATGCTCTGCTGAACCATAACGAAGCCTCAGGTGACTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTGCTGAGACTTGATCGGGACATTCCATCAACATATGAATTCTTCTGGTCGCACGGAATGATTTCTGATGAAATAGGCCTTGCCATTACAAATGAGTGCGATTTTGACGATTATACTTATGCAAGTCCTCACAATGTGTCCGATTCTTGCAACCATGCGATATCGGAGGCAAATCGCATAGTTGGGGCTTACATCAACACCTATGATGTGATTCTGGATGTTTGCTATCCATCCATAGTTGAACAAGAGCTGAGATTAAAAAAGATGGCTACCAAAATGAGTTTGGGCGTAGATGTTTGTATGACCTATGAAAGACGTTTTTACTTCAATCTTCCTGAGGTTCAGAAGGCCCTCCATGCTAATCGAACCAATCTACCATATTCCTGGTCTATGTGTAGCAGGGTTTTAAATTATAGTGACACTGATGGGAACATCGATATCCTTCCGATTCTCAAGAGGATCGTTGAAAATAAAATCCCAGTTTGGGTTTTCAGTGGAGACCAAGATTCAGTCGTGCCATTACTGGGTTCTCGAACACTGGTTCGTGAACTAGCCCATGACCTGAAGTTGGGCGTGACGGTTCCATATGGAGCATGGTTCCACAAAGGGCAGGTGGGAGGTTGGGCAACAGAGTATGGAAACTTGTTGACATTTGCGACGGTGAGAGGGGCTGCTCACATGGTGCCTTACGCACAGCCTTCAAGATCTCTCCATCTTTTCAGTTCATTTGTGCGTGGCCGCCGCTTGCCCAACACCACTCGTTCTTCCATTGATGACTGA 1458 0.4643 MDKGRVVICEGLGILEMGRFWLVGILIVLGNAWSLAQGYPSEDLVVSLPGQPKVGFRQYAGYVDVDVSHGRSLFYYFVEADKDADLKPLTLWLNGGPGCSSIGGGAFTELGPFYPQGDGRGLRRNTMSWNRASNLLFVESPAGVGWSYSNTTSDYTCGDASSANDMYLFMLKWYEKFPTFRTRELFLTGESYAGHYIPQLANALLNHNEASGDFKFNIKGVAIGNPLLRLDRDIPSTYEFFWSHGMISDEIGLAITNECDFDDYTYASPHNVSDSCNHAISEANRIVGAYINTYDVILDVCYPSIVEQELRLKKMATKMSLGVDVCMTYERRFYFNLPEVQKALHANRTNLPYSWSMCSRVLNYSDTDGNIDILPILKRIVENKIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKLGVTVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFVRGRRLPNTTRSSIDD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2798 485 Gene3D - 373 472 - -
Acco05g2798 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 Gene3D alpha/beta hydrolase 40 302 IPR029058 -
Acco05g2798 485 FunFam Carboxypeptidase 373 472 - -
Acco05g2798 485 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Acco05g2798 485 Gene3D - 326 362 - -
Acco05g2798 485 FunFam Carboxypeptidase 39 303 - -
Acco05g2798 485 Pfam Serine carboxypeptidase 50 472 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 459 IPR001563 GO:0004185|GO:0006508
Acco05g2798 485 SUPERFAMILY alpha/beta-Hydrolases 36 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2798 Acco-ChrAcco05 43135339 43138469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2798 332 475 Calmodulin-binding Proteins AT2G22960 25.170 6.30e-11 59.7