Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2797 ATGCAGAGTTGCCGCTACCTCACCCCCCGACCATGGGCCACGACCAGCCTATATCGCACAAAATGCCATCCTCGATTACCGACCCGCACCATCAGGATCCGATTACCACCGTCGATCTCCGCCGTGGCCGTCCCGGTAAAAAATGGAAAGGCCCACTCAATGCCGCCGGAGAAGGCCGAAGTGTTCAAGTCCCTGGAACGCTGGGCTTCGGAGGGGCTTCTGCCGCTGCTGAAACCGGTGGAGCAGAGTTGGCAGCCGCAGAACTTCGTGCCCGACTCATCGTTGCCGTTCAATGAATTCATGGATCAAGTGAAGGCACTGCGCGATCGGACGGCCGAGCTCCCTGATGAGTACTTCGTGGTGCTTGTGGGTGATATGATCACGGAGGATGCACTGCCTACCTATCAGAGCATGATAAACAACCTGGATGCGGTCGGGGACGAGTCCGGAGCAAGCCCGGATCCGTGGGCCGTTTGGACCCGTTCTTGGACGGCGGAGGAGAATAGGCATGGGGATTTGCTGAGAACCTATCTTTATCTATCCGGTCGGGTTGATATGCACATGGTCGAAAAAACCGTACAGTATTTGATTGGAGCCGGAATGGATCCGGGGACAGAAAATAACCCCTATCTGGGATTCGTGTACACGTCGTTTCAAGAGAGAGCCACATTTGTGTCGCACGGCAATACGGCTCGGTTGGCGAAGGAGGGGGGAGATCCGGTGTTGGCGCGCATATGTGGCACCATCGCAGCAGACGAGAAACGCCACGAGAATGCTTACGCGAGAATCGTCGAGAAGCTGCTGGAAGTGGACCCCAGTGGAGCAATGCAGGCCATCGCAGACATGATGCACAAGAAGATCACCATGCCGGCCCATTTGATGTACGACGGGCAGGACCCGTGCCTGTTCGAGCATTTCTCTGCGGTGGCGCAGCGGATGGGAGTGTACACGGCGAACGACTACGCGGACATATTGGAGTTTCTGATCCGACGATGGGGGTTGGAGAAGCTGGAAGGGCTGACGGGCGAAGGGAGACGTGCACGGGATTTCGTGTGTGGACTAGCACCGAGGATAAGGAAGTTGCAAGAGCGAGCCGATGAGCGAGCGCGCAAGATGGCGCCTCAGGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACTATGTGA 1176 0.5689 MQSCRYLTPRPWATTSLYRTKCHPRLPTRTIRIRLPPSISAVAVPVKNGKAHSMPPEKAEVFKSLERWASEGLLPLLKPVEQSWQPQNFVPDSSLPFNEFMDQVKALRDRTAELPDEYFVVLVGDMITEDALPTYQSMINNLDAVGDESGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMHMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYARIVEKLLEVDPSGAMQAIADMMHKKITMPAHLMYDGQDPCLFEHFSAVAQRMGVYTANDYADILEFLIRRWGLEKLEGLTGEGRRARDFVCGLAPRIRKLQERADERARKMAPQGVKFSWIFNKEVALTM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2797 391 SUPERFAMILY Ferritin-like 47 387 IPR009078 -
Acco05g2797 391 PIRSF Dlt9_acylACP_des 10 389 IPR005067 GO:0006631|GO:0045300
Acco05g2797 391 CDD Acyl_ACP_Desat 57 365 IPR005067 GO:0006631|GO:0045300
Acco05g2797 391 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 42 389 - -
Acco05g2797 391 Gene3D Ribonucleotide Reductase, subunit A 43 389 IPR012348 GO:0016491
Acco05g2797 391 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 47 387 IPR005067 GO:0006631|GO:0045300
Acco05g2797 391 Pfam Fatty acid desaturase 57 383 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2797 Acco-ChrAcco05 43128019 43129483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2797 32 389 Acyl Lipid Metabolism Gene Families AT1G43800 76.374 0.0 582