Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2782 ATGGAAGACGGCAGATTTTCCGCCCTTCCTGCTAACGAAGAATATCCTGAGAATATAATGTTGGGATCATTCGAACATACACATTCTTATGTCGTCATTGCATGGGATGCCACCAGAGATCGAAGTGAGAACGACATCAAGCTCGTGGTTGATAACGTTCGAAACAAGAGTGGCATTCTCAGGGCAGGTCACAAACTGCTTGTGCTCGGCCTTCTGTATAAGGTGCCTCATCCCATGGGATACCAGACGTTAGCATCCCCCGAGTCTTTTGCTGGCACTAACTCGCGTGCAATGGAGGACGAGGTTAGGAGGAAAGTGGAAGCCTGTGCAAGCATTCTTTTGCCAACCTTCCAAGTTTGCCAACAAGAGGGGGTCAGCATTGAAGTCAAAGTCGCTGCAGGTTTTCCAGTTAAACAGGTTATTTTACAAGAGATTGCATGCTATAATGCAGATTGGATCATACTCGATAGGCATCTTCGACGAGATCTGAGATATCGTTTGGACAAGATACCGTGTAAGGTTGCATTAACTAGGGATGATTTCACTGTGGAAACTTGGAGATCTCAACATTCTCGTGAAGCAGATGTCACAGATCACAAGCCCGTCTATTCTCTGTCCCGTGTTGTTTCGTTATCAGATGTCACAGATCACAAGCCCGTCTATTCTCTGCCCGCCTATTCTATCCTTCATGGGATAAGCCCCAAAGGTGAACCCAAGCAAAACAAATATGGGCTTCTTCCGAAATCATCAGATTTTCCAATTCTTTGTGCTGGTTGTGGGATAAGGACGGAGTTGTGCGCGAAGGAATTAATGAAGTTCAGCTATTCCGATATACAGAAGGCAACAAACAATTTTTCAAATGATAACTTGTTGGGTGAAGGTGGATATGATCATGTATACAAGGGTGTGCTTAGAGACGGACAGCAAATTGCAGCCAAGGTGAGAAAAGAAGAAAGCAGACAAGGGTTTTCTGAGTTCAATTCTGAGATTTATGTCTTAAGTTTTGCGCGACACAAGAACATAGTGATGCTGCTAGGTTACTGCTGCAAGGAAGGGCAAAATATTCGGGTGTACGAATATATTTGCAATAAATCTCTTCACTGGCATCTGTATGATAAAAACGCAAAAGTTCTGGAGTGGCGCCAAAGATATGGCATTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTGCACGAGGAATGCCGTGGAGGTCCAATCATTCACCGAGACATGAGACCAAACAATATACTTCTCACTCATGACTTTGTTCCCATGCTAGGTGATTTTGGTCTGGCCAAATGGACGGTGGATGATGAGACTCTGCGAACAAGGATAATGGGCACATTGGGATACCTTGCTCCAGAGTATGCAGAGGATGGGATTGTTTCAGTGCTGACAGATGTGTATGCGTACGGCATTGTGCTGTTACCATTGATATCAGGACGTAAGGTGATCAATGACGATCATCTCCAACAAATCTCTCTCCGACAGTGGGCGGAGCCATTGATTGAGAAGTTGGCTTTCAGTGAACTCGTTGACCCTCGTCTTGGGGAATCATATGACACTGAGGAATTATACCTCATGGCCAATGCAGCATACTTTTGTGTCCAAAGAAACCCCGCGAGGAGACCTTCCATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAACCTGCCCACCTGGCCATTATGAGAGATCAATTTTGA 1704 0.4536 MEDGRFSALPANEEYPENIMLGSFEHTHSYVVIAWDATRDRSENDIKLVVDNVRNKSGILRAGHKLLVLGLLYKVPHPMGYQTLASPESFAGTNSRAMEDEVRRKVEACASILLPTFQVCQQEGVSIEVKVAAGFPVKQVILQEIACYNADWIILDRHLRRDLRYRLDKIPCKVALTRDDFTVETWRSQHSREADVTDHKPVYSLSRVVSLSDVTDHKPVYSLPAYSILHGISPKGEPKQNKYGLLPKSSDFPILCAGCGIRTELCAKELMKFSYSDIQKATNNFSNDNLLGEGGYDHVYKGVLRDGQQIAAKVRKEESRQGFSEFNSEIYVLSFARHKNIVMLLGYCCKEGQNIRVYEYICNKSLHWHLYDKNAKVLEWRQRYGIAIGTAKGLRFLHEECRGGPIIHRDMRPNNILLTHDFVPMLGDFGLAKWTVDDETLRTRIMGTLGYLAPEYAEDGIVSVLTDVYAYGIVLLPLISGRKVINDDHLQQISLRQWAEPLIEKLAFSELVDPRLGESYDTEELYLMANAAYFCVQRNPARRPSMGEVVRLLEGEPAHLAIMRDQF 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2782 567 ProSitePatterns Tyrosine protein kinases specific active-site signature. 406 418 IPR008266 GO:0004672|GO:0006468
Acco05g2782 567 Pfam Protein kinase domain 286 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2782 567 ProSiteProfiles Protein kinase domain profile. 285 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2782 567 Gene3D Phosphorylase Kinase; domain 1 259 360 - -
Acco05g2782 567 SUPERFAMILY Protein kinase-like (PK-like) 270 553 IPR011009 -
Acco05g2782 567 FunFam Lectin-domain containing receptor kinase A4.3 361 566 - -
Acco05g2782 567 PANTHER OS01G0750732 PROTEIN 202 555 - -
Acco05g2782 567 CDD USP_Like 87 164 - -
Acco05g2782 567 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 257 360 - -
Acco05g2782 567 Gene3D Transferase(Phosphotransferase) domain 1 362 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2782 Acco-ChrAcco05 42985687 42989596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2782 273 554 Trihelix Transcription Factor Family AT5G38560 44.828 4.01e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco05g2782 Pkinase 2.2e-36 CL0016