Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2763 ATGCTTGCGGAATACGCAGTCCCAATGCAATGCCTTTCATGCGAGGAATATTACGGCCTAGGAGATGCCGGCACCTGCAAAGAGTGCTACAAAGAAGCCAACGAGACCAAGGAGGAGCTCAAGACTGAGATCGACGCCTTGAAGGCCAAAGTTGCCTTCCTCAGCCTCTTGTCTCCTGTTGATAACCATAATCCCTCCGATACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTTCCTTCCCTGACTGTTCCGGCTCACAAGGTTGTTCTGGCGAGTCGGTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGAGGAAAGACGAAGTGGTACCATAAAGATTAGTGGTGTATCATACGATGCTCTTGGTGCCTTCGTTGACTATTTGTACACTGCAGAAGCACGCCTTGATGACCAAATGGCCTGTGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCATGTTGTGAAAAATATCTGATGGCTCGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTTGCTCACCAATACAATGCTAAACAATTGCTAGATGCGGCCTTGGCATTAATTACAGACAACATGGACGAGTTTTCTAAGCATGAGGAGTATGAGGATCTGGTGGAGAGTAACCCTCGTATTGTGGTTGAAATCTATGAAGCCTATCTCTCAAAACAGCGTAATACTGCAGCCAGCAAGAGAGCTTCCAAATACATGGCAGTCCTGACTGAATATGAATAG 768 0.4596 MLAEYAVPMQCLSCEEYYGLGDAGTCKECYKEANETKEELKTEIDALKAKVAFLSLLSPVDNHNPSDTDVILVPSDESSDLPSLTVPAHKVVLASRSPVFRAMLENDMEERRSGTIKISGVSYDALGAFVDYLYTAEARLDDQMACDLLVLAEKYQVKHLKACCEKYLMARLNWEKAVANYAFAHQYNAKQLLDAALALITDNMDEFSKHEEYEDLVESNPRIVVEIYEAYLSKQRNTAASKRASKYMAVLTEYE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2763 255 Pfam BTB/POZ domain 66 169 IPR000210 GO:0005515
Acco05g2763 255 Coils Coil 30 57 - -
Acco05g2763 255 FunFam BTB/POZ domain-containing protein 174 247 - -
Acco05g2763 255 ProSiteProfiles BTB domain profile. 68 142 IPR000210 GO:0005515
Acco05g2763 255 Gene3D - 174 247 - -
Acco05g2763 255 CDD BTB_POZ_ZBTB_KLHL-like 68 155 - -
Acco05g2763 255 PANTHER SPECKLE-TYPE POZ PROTEIN 42 239 - -
Acco05g2763 255 SMART BTB_4 68 172 IPR000210 GO:0005515
Acco05g2763 255 SUPERFAMILY POZ domain 64 169 IPR011333 -
Acco05g2763 255 CDD BACK 181 216 - -
Acco05g2763 255 Gene3D Potassium Channel Kv1.1; Chain A 50 173 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2763 Acco-ChrAcco05 42863818 42866824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco05g2763 BTB 1.2e-22 CL0033