Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2759 ATGGATCATCCCTCCCATTCTCATCACCAGCACCAGCACCAGCATGCAAGGTACGCTCCTCTTCCCCTTCATCACCCGCGCCACTCGCAGTTCCCCGAAGATCCCCGTTTCCGCCCTCACCACCTTCCTCCGCCGCCACCGCCGCCGTCGGCACCAACTCTTCCACCCTTACCCCCTCCTCCGTCTCTTTCCTATCGAAACGTCCGCACCCCTCCCCCATCGCATCCTCCCCCATATAAACCTCCTCATCAATCCCAGTTTTCTTTCAACGCCCCGAGCTATGCCCACCGTCCAGTTGAAGAGGATCGCTCTGTATCTGCGAGCCACCCTCATGATTTTACGCACTCGCAGAGGGTTTCAAATCGGATGATTATTGAGAATGATCGTCCTCGCCAAAGTCTCCCTGATTTCGACTATCGCAGTACCGATAACCGCATCGGTGGTTGGAACCCACCGAGGGTTTTGTCAGATAATCGGCCGTCGAGGCCTTACCCTCCCATCGAATTTGACCGGGAATTGCATCATCAGCGCCCATTGAATCACAAAATAGCGCCGCCGTATCCGCCAACTGATAGAGTTAGGTTTAATTCAGAGGGCAACTCTAGGGGAAGAGTTGATCTCATTGATGGGTTCGAAGTCAAGACCAGGGATGAGTTTGCATGGGATAGAGATGATGAGAAATATCTTCGTCGCAGGGATTTTGGATCAAATCTTAACGCATCTTCTGGAGACTTCGGAATCATGTCTAGTCAGAGTACATTATTAAGGGATCTTGATTCGAAAAATGGGGATTATGTGCTATACCGCTTGGAACGGGACAGTGAAATATCTAGGGGTACTAGAAGAGATGGGCTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGGCTCCAGAGACCCACATAATTCATCTTTTGAACTGGGAAACAACGAGAATGGTGGCGATGGTATTAGGGTAACGTCCGGGAAGTATTATGGTTCGGAATTGGGTAGATATAATAATAGAGGAAACAGAGAAACAGGTCATGAATTTAGTCGTGCTCCAAAGAAGCAAATTCAGAAAAAGAGCGCACTTCTTAGACTTCAAATGGTAAAACCAAATCACAAGAACCGTGAGATTGAACAGTTACAATATACCAGTTATGGTGATGACTCAAGCTCTAATTCCTTTACAGCTAAAAATCAATTTGAATATTCAGGTTTTGGGGTCAAAGCAGAAGAGAGAGAGAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTTGTGGCCAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGTAGATATCACCTCTGTTTCTAATACAGATTTTGCTCCTGCAGAGAAGGGAAAAAATGGTTTGGCCTATGACAGCGATTCTCCTGATTTAAAACCTGCCAAACCATCTATGGCTGCTGTAAACTTAGTTGGCTCACCTTGCAAGGCGAATCTCATCCCTAGTTCCAACAAGGAACTTAACTCACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCTTTGTGCTAGTGTAGCTACTAATTCTCATGTAAAAAATGAGGGGGCCCAAACCCCTAAGGGAATTGTTTCTCATGAAATTACCAACCCTTGCTCTGTTAAAACATCTCAAAGGGTTGCTCCAAGGGTTTCCAAGAAGAAGAAAATTGTAAAGAAAGTGGTGAAGAAAGTTACTTTGAATCGTAATTTAAATGTCTCAAGTTCCATGTCATCAAATATGTCTAATGGAACTGTGAAAGCTGATAGCATTGGTCCTTCATCTACATCTGAATCTGATAAAACTTCTTTAAAGGAGAAAATCACTACTGTTGACAAGGTGTCCTTGCCAGATAATCTGATGTCCTCCCCAGAGGAAGGACAATTGCTGCCTGATAATGGTAAGGAAGATGTACCTTTGCCTAGCACAGGGTCACATACCAATTCACAAGAGCATGAGGCTGATGATAACCCTGATATAGGGCAAGTAGATAGAATTGAAAGAAGTGAAAACATTTCTGATTCCTCATTGGGTTCTTTTAGCATTGAAGATGAAAAGAATGATTCTGATTGTCCGAATGCAGATGATTTTGTCCATGGCTTGCATAGTAGTGTAAGTATTGACAAGGCTTCTAAGGCCAAGTCACCGAATGGAATTACATTTTCTGATATTAGTGACAAGGATGATGTTAATATGCAACTTTATCAGAAAAAAATGGCCCTATCACCTCAGCAGTATTCAAATGTACAATATTTAGATAATCAGTTTCAGGTAGAAGATGGTAAGAACAGCAGACTGTCAACATCGGGTGAGAGTGTAATAAACACAGATGTTATAAACACATGTAATTCTGCCAAGGTTAGTCTGGATTGCTTGTATTCTAATGATCTTACTGGTAATGCACAAAAGAACATTACAGTTTCTGACGTTGGAAATGATGGCAAGGTAGATTGCAAAACTAAAGCCCTACCATTATCTAACAGTGTTATTTTGGAAGAAAACCCAGAGACCTGCTCCTCTGTACCAAATTGTGGAATGTTTAGTCTTTCTAGTTCTGCAGAAACTAGGATCTCAGATGGCCAAGAATGCCCAAAAAATGCTAGAGTACCCATGCATGTTTCTGATAACAGCCCCACTAATTCAGAAGAGAATATCATGGTTCTCCATAGTGTTATTGTTAAAGATTCTGGAAAGGAGGCGTCCCCTGTTGATGCCAATGCATCTCCTGAGAATTGTACCACAGAACAGTCTCCAAATGCTAATTTTTTGGTTAGGTTTGCTGAAGGAGATACAAATATGTCTAAAAAAAGAAAAGTTGAGACACATTTAAAATTTTCAAGTTCAGATATTGGAGGCATATCTCCTGACCCTATACATACAGTTAGCCTTGCAAATGTGCATACAACCTTAAGTCTGTTGACGGATTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCAAAGCTCTGATATTTGCTTACCATCCATTACAGGTGACATTACTTTTTTAGATGGGAAAGGGGAGGTTTCAGAGAGAGAAGTTTACTTTGGAAATGCAGGTAGTAACAGTGCAGATAGGGCTTCCCCATTGTCTAGAATCAATGAAGTTTCTACTAGTTACATGAATGTTAATTCATTGCAAGCTGAACTTTCTGATGCAATTGCGGTTGCCACATCTTGTGCACAAGTTCCTATTAATATTATTGATAACAAGACACGCCAGGAAGAGGATGCACTTTCAAACATGGTTAAACCTTCTGCTTCTCTATCACTGGCTTATCCAGAGAGTAGTGCTAACTTGTACATCAATAGTCCGTTTGGAGGATCTCTTAAGTCTTTGGACGCAAATACAAATATTACCAAGTCTGAATACTCCCAATTGCAGCACCCAGCTATCAACTGTCATTCACCTGGGGATTTGACTTTTCCAACTGATCAGTTTCCAGTGCTGGAAAATGAGCGGAAAGAAAATTCTCTTCCATTTGTGCCTATAAACAACGTTCAGAAGGACATTCAGGTTTCTGGAAATACTGAGATAGAGAAGATTGATATGCAGGATATTGGAAAATGTGAGTCCGGAGAATTTGTAAAAAGATCTCTGAGTGCTGACTTGGAATTCGATGATCCTCAAACAAAGGATGATTCACCTCTTGAGCGTCAATCTCTGGCCGTCCCAGCTGATACTGATGCTGTAACAACAAGTGACTGCAGTACAGTATCAGATATGCTTTCTCCGGGGACCATGCCTGACATGCTTGATAGTAGGACTGCAGATTGTCAAGCAATCCAAAATGAAAGCACTCATGGAGATGAAGATAACGCGGATAGTAGATCTAAGGTTGAACAGGATTGTGACTTACCAGCTTCTACATCATATTCACAGTATACTACAAAAAAGAATATAAAATTAAGTCCTACAACCAGGCATGATAACTTGATCACAGGGAAGATGATGCCCCAGCCTTTGCAAGCGGATTCCAAGGTTATGACTCAAGGACTGAATTCTTCTTGTTCAGAGTTAAATTGTGGCAAAAATCACTTGGTTTCTGCCATTCCTACTACTTTCCAAGGTCAATCCTACTTAAATTTTCCCAAGTCAAAGACATCTGCATATCCAACCCAGGTTTCAAATGTTCGAACATGGCATCGAACAGGTAATAATTCTGGTTCTCTACCAGGAAACAAGCCTTCGGTGGGAACTGTGCCTACCAAAAGGTCAATTTCAGAAAAGAAAGGGAACTTTCAAAATACTTCTTACATTCGTAAAGGTAACAACAGTATTGTAAGGAAACATACTTCTGTTTCTGCTTCACCACAATCCTCGGCTAATCAGTCTTCTTTGGGGTTTAATGAATTTCAAAAGAGCACTGGATCTGAAATTATGGTTGAAATCTCAAATCACGCCAATCTCTTGAAAACAGGATTGATACACGCTCCTCTGGAGAGGCAAAAAACACCTCCTCTACCTGTTGACACTAAATTACCTGATCATATGGCAACAGCGTGTGAGGAGAATAAATCTTCCCCATTAATAGAACCCTGTTCCAATGCTTTCCGTGATAGTGCATCTGAACCTGAACCTAGAAACTTTACTGAGCCATCTGAACCTGAACCTCCAAACTCTGCTGATGATGCACTTAAGTTGGATAAAACTGTTGAAAATCTAACTGCCCCATCAAACAACGTGGAAAGCCAAGTTGAAGCACATGATGAGAATGTGTCTTCTAATTCAAAGAGAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCCAATTCCTGTGAACTTCCTGCTGCTCCTGATGACAACGTCCAGATGACCTCTTCTGATGGATACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCAAATCAACCAGACAGTTACAATGCCCACTGTAAACTCTGATGGGCACAGGGCCCGTAAGGCTAGCTGCAACAGGAGGTTTGGTAAGAGGCGGTCACTGAAGGTTGTTGGAAGGTCATGTAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGTGCAAGTTCATCCAAAAAGGACAATGACTCTCTGCATCATCAGAAGGTTCTGCCTTACTTGTTTCCATGGAAAAGAGCAACATATTTAAGGAGTTTCATTTATAGTCCTGCTTTGAGCTCCAATGCCAATTCATTATCTGCAATCAGCAAGAAGTTGGTTCTCTCGAGAAAGAGGGATACTGTTTATACTAGGTCAACCCATGGATTTTCCCTTCGGAAATCCAAGGTGCTAGGCCTTGGTGGATATAGTCTAAAATGGTCAAAATCAATTGAGAAGTCTTCAAAGAAAGCTAATGAGGAAGCCACACTTGCAGTTGCTGCTGTAGAGAAGAAAAAGAGGGAACGGAAAGATGTTGCTAGTATCAGTTCTCAGGCAAAGAGAGAACGTATATTTCGTATTGGGCCAGTTCGTTACAGAATGGACTCTTCAGGGAGGGCACTTCAAAGGATTTCAGATGATGAGTCCCTGGCCTCTGCTTCACTCCGTTCAGGTTTGCATTTGAAAAGTTCATACATACCAAGGAGATTGGTGATTGGAAATGATGAATATGTTCGAATTGGCGATGGCCATCAGCTTATCAGAGACCCAAAGAAGCGAAACCGTTTATTGGCTAATGAAAAAATTAGATGGAGTTTACACACAGCAAGACAGCGATTGGCTCGAAAGCAGAAGTATTGTCAATTCTTTACTAGATACGGGAAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCGAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTCATGTTCCACTCCCAACTGCAAATTGACTCATAAGATTATTCCTGAGAGAATGCCTGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAATTGCCCCTATAGACATGTTAATGTGAACCCAAAAGCATCTGCTTGCGAAGGATTTCTCCGGGGATATTGTGCCGATGGCAATGAGTGTCGGAAGAAGCACACCTATGTCTGTCCTACTTTTGAAGCAACCGGAATCTGCACCCAAGGGACCAAATGCAAACTTCATCACCCCCAAAAACAAGGCAAGGGAAAGAAAAGGAAGAGATCGGTAGTTCAGAGGAACTGTAAAAGGAGAAGATACTTTGGTTCTTTAAGGATTGATGTTTCTGAAACTGGGACGATGGTTGTGGCTCCAAGGCAAGGGGAACAGAATAAGAATGACCTTGAAGAAGAACTGGCTGACTATATCAGTCTCGACATCGACAGTGACGATGTTGCAGAACTAGCCGAACAAGCAAGCGAGCAATCAACATTGTGTGATAGTGAACCTGTAGATATAGTATTGGATGATGAGGATGAACTCATTAGACCTGTTCTGATAATGAACAAGGATACATGGGCGGAGGCATCTCCTGTCTGA 6456 0.4201 MDHPSHSHHQHQHQHARYAPLPLHHPRHSQFPEDPRFRPHHLPPPPPPPSAPTLPPLPPPPSLSYRNVRTPPPSHPPPYKPPHQSQFSFNAPSYAHRPVEEDRSVSASHPHDFTHSQRVSNRMIIENDRPRQSLPDFDYRSTDNRIGGWNPPRVLSDNRPSRPYPPIEFDRELHHQRPLNHKIAPPYPPTDRVRFNSEGNSRGRVDLIDGFEVKTRDEFAWDRDDEKYLRRRDFGSNLNASSGDFGIMSSQSTLLRDLDSKNGDYVLYRLERDSEISRGTRRDGLGDSKRWVNDRKGSRDPHNSSFELGNNENGGDGIRVTSGKYYGSELGRYNNRGNRETGHEFSRAPKKQIQKKSALLRLQMVKPNHKNREIEQLQYTSYGDDSSSNSFTAKNQFEYSGFGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAVSDVDITSVSNTDFAPAEKGKNGLAYDSDSPDLKPAKPSMAAVNLVGSPCKANLIPSSNKELNSQKKVSDSCSQLCASVATNSHVKNEGAQTPKGIVSHEITNPCSVKTSQRVAPRVSKKKKIVKKVVKKVTLNRNLNVSSSMSSNMSNGTVKADSIGPSSTSESDKTSLKEKITTVDKVSLPDNLMSSPEEGQLLPDNGKEDVPLPSTGSHTNSQEHEADDNPDIGQVDRIERSENISDSSLGSFSIEDEKNDSDCPNADDFVHGLHSSVSIDKASKAKSPNGITFSDISDKDDVNMQLYQKKMALSPQQYSNVQYLDNQFQVEDGKNSRLSTSGESVINTDVINTCNSAKVSLDCLYSNDLTGNAQKNITVSDVGNDGKVDCKTKALPLSNSVILEENPETCSSVPNCGMFSLSSSAETRISDGQECPKNARVPMHVSDNSPTNSEENIMVLHSVIVKDSGKEASPVDANASPENCTTEQSPNANFLVRFAEGDTNMSKKRKVETHLKFSSSDIGGISPDPIHTVSLANVHTTLSLLTDSSVSEVLNPYVQSSDICLPSITGDITFLDGKGEVSEREVYFGNAGSNSADRASPLSRINEVSTSYMNVNSLQAELSDAIAVATSCAQVPINIIDNKTRQEEDALSNMVKPSASLSLAYPESSANLYINSPFGGSLKSLDANTNITKSEYSQLQHPAINCHSPGDLTFPTDQFPVLENERKENSLPFVPINNVQKDIQVSGNTEIEKIDMQDIGKCESGEFVKRSLSADLEFDDPQTKDDSPLERQSLAVPADTDAVTTSDCSTVSDMLSPGTMPDMLDSRTADCQAIQNESTHGDEDNADSRSKVEQDCDLPASTSYSQYTTKKNIKLSPTTRHDNLITGKMMPQPLQADSKVMTQGLNSSCSELNCGKNHLVSAIPTTFQGQSYLNFPKSKTSAYPTQVSNVRTWHRTGNNSGSLPGNKPSVGTVPTKRSISEKKGNFQNTSYIRKGNNSIVRKHTSVSASPQSSANQSSLGFNEFQKSTGSEIMVEISNHANLLKTGLIHAPLERQKTPPLPVDTKLPDHMATACEENKSSPLIEPCSNAFRDSASEPEPRNFTEPSEPEPPNSADDALKLDKTVENLTAPSNNVESQVEAHDENVSSNSKRIVYVKRKSNQLVATSNSCELPAAPDDNVQMTSSDGYYKRSKNQLVRTTFESQINQTVTMPTVNSDGHRARKASCNRRFGKRRSLKVVGRSCKPLRASLVWTLCGASSSKKDNDSLHHQKVLPYLFPWKRATYLRSFIYSPALSSNANSLSAISKKLVLSRKRDTVYTRSTHGFSLRKSKVLGLGGYSLKWSKSIEKSSKKANEEATLAVAAVEKKKRERKDVASISSQAKRERIFRIGPVRYRMDSSGRALQRISDDESLASASLRSGLHLKSSYIPRRLVIGNDEYVRIGDGHQLIRDPKKRNRLLANEKIRWSLHTARQRLARKQKYCQFFTRYGKCNKDDRKCPYIHDPSKIAVCTKFLNGSCSTPNCKLTHKIIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASACEGFLRGYCADGNECRKKHTYVCPTFEATGICTQGTKCKLHHPQKQGKGKKRKRSVVQRNCKRRRYFGSLRIDVSETGTMVVAPRQGEQNKNDLEEELADYISLDIDSDDVAELAEQASEQSTLCDSEPVDIVLDDEDELIRPVLIMNKDTWAEASPV 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2759 2151 MobiDBLite consensus disorder prediction 576 698 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 278 302 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 131 161 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1271 1285 - -
Acco05g2759 2151 ProSiteProfiles Zinc finger C3H1-type profile. 1961 1987 IPR000571 GO:0046872
Acco05g2759 2151 ProSiteProfiles Zinc finger C3H1-type profile. 1988 2015 IPR000571 GO:0046872
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1506 1547 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 652 674 - -
Acco05g2759 2151 PANTHER CCCH ZINGC FINGER 340 2143 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1 117 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 41 83 - -
Acco05g2759 2151 FunFam Zinc finger CCCH domain-containing protein 7 1989 2050 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1229 1247 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 684 698 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 179 198 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 8 22 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 336 351 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 303 317 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 576 602 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1268 1289 - -
Acco05g2759 2151 SMART c3hfinal6 1988 2014 IPR000571 GO:0046872
Acco05g2759 2151 SMART c3hfinal6 1906 1934 IPR000571 GO:0046872
Acco05g2759 2151 SMART c3hfinal6 1961 1986 IPR000571 GO:0046872
Acco05g2759 2151 SMART c3hfinal6 2015 2037 IPR000571 GO:0046872
Acco05g2759 2151 SMART c3hfinal6 1935 1959 IPR000571 GO:0046872
Acco05g2759 2151 Gene3D - 1933 1987 - -
Acco05g2759 2151 Gene3D - 1988 2051 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1386 1407 - -
Acco05g2759 2151 ProSiteProfiles Zinc finger C3H1-type profile. 1906 1935 IPR000571 GO:0046872
Acco05g2759 2151 FunFam zinc finger CCCH domain-containing protein 3 1936 1987 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 1228 1256 - -
Acco05g2759 2151 MobiDBLite consensus disorder prediction 278 353 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco05g2759 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2759 05 42832474 42841011 Acco05g2759 05 42832474 42841011 ECH