Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2758 ATGACAATGCTAAATGCGGGCCTAGCCGGAGAAGGCAGCGACGGGAAATCAGGTGACCGGACGGTGTTGGTGGGAGTGAAGTTGGATTCTCCCAGCAGGGAGTTGCTCACATGGGCTTTGGTTAAGGTTGCTCAGCCTGGTGATATTGTGATTGCTCTTCATGTTCTTGGAGATGATGAAATTGTGAACCGAGACGGGAAGGCGTCGCTTCTTTCGCTGGTCACGGCATTTGACTCTGTTCTTGCTGTTTACGAAGGCTTTTGCAATTTGAAACAGGTGGATCTCAAACTCAAGATCTGCAGGGGCTCGTCAGTCCGGAAAATCTTAGTTCGAGAAGCGAACGCCTATTCTGCAACTCATATTTTAGTGGGAACTGCTCAAGGCCTTCATAAATTGCGAACATCTACCTCAGTAGCTAAGTACTGTGCTAAGAAGCTATCCAAGGACTGCTGGGTTATTGCTGTCAATAATGGAAAAGTTGTATTCAAGAGAGAAGGCTCATCAGCAGCTCCTGTTAACTTGCGAGGAATTGATAGTCGGGGCAGAAATGGTTTGCTTGCTTCGATTCACCGGACACTTAGTTCTAGTTCCAAAGTACTAAATGATGACAACACGGGAATATTTGACAAGGGCACCAGCAAAGCTTCGGATAATAGCTTAGCCAAGGCCTTTATTGATTCTACAGAAACCGTTCAGAAACGAAGCTGCTCGCTTTGTGGTCCAGCATATGCGTTGCCAAATTCTGCTTGCAACCATGCTTCAGAAGAGTCTTCTGGTGGTAGCGGCAAAGAGAATTCTATGTCTATAGTGCTTGCACAGACGACTAAGGCAGCGCCAAGTGCTAGCGTTCTTCCAGCCAGAAAATCGCCTGAACTAAAACCTGGTTGGCCTCTACTACACAGGACAATTTCTTCAGGCCGGCAATCTCCTGTCAGGTCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAGTTGCCGAGTAGAAACCTTTGGCATGCTGGGGATCATGTTCATAGACCAGCCAGTTCTGTTCCAGATCATCATCAATCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCATTAAATGCTCAAATAGGGATTGCCTCTTCTCCTGACCATAATTCAAGGAAAATTCCTAAAGAATTGGAAGGTCTTCCTGAGAAATACTCATCAACCTGCAGATTGTTTCAGTACCAAGAACTTTTTCTGGCTACGTCAAATTTCTCGCCTGAAAATTTGGTCGGTGAAGGAGGAAGTAGTCAGGTTTATAGAGGCTATCTTCCTGATAGCAAGGAACTGGCAGTGAAGATCTTAAAGCCCTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATCACTCCCTTGCACCACAAAAACATCATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAATCTTCTTTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATGCACTTGTGTTTGGTTGGAACGAGAGGTATAAGGTGGCAGTTGGTGTAGCTGAGGCTCTAGATTATCTGCATAATAGAGATGCTCAGCGTGTGATTCACAGGGACGTAAAGTCATCAAATGTATTATTGTCTGAGGATTTTGAACCCCAGCTATCTGATTTCGGGCTTGCTAAATGGGCATCATCCTCATCATCTCATATAACTTGCACAGACGTTGCTGGGACCTTTGGCTATTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGATAAGATTGATGTCTACGCATTTGGAGTCGTGCTCCTTGAGCTTCTCACTGGAAGAAAGCCCATAAGTGGTGATTATCCTAAAGGTCAAGAGAGCCTCGTCATGTGGGCAACTCCAATTCTGAATAGTGGAAAAGTTGCACAATTATTAGATCCAAGCCTGGGTAGTAACTACGATCAGGACCAGATGGAAAGGATGGTCTTGGCAGCCTCGCTTTGCATCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCGTATTACAAAGCTCCTTCAAGGTGATGATGATGTAATTAGGTGGGCAAGGTCAGAAGCGGATGCTTCTAAGGCAATAGAAACGAACGATGATGAAGGTTGCGCAACTTCCAATTTACAGTCACATCTCAATCTAGCATTCCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTATTGAGCAAAATGTGTCGTTAGAGGACTACCTGAAAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2277 0.451 MTMLNAGLAGEGSDGKSGDRTVLVGVKLDSPSRELLTWALVKVAQPGDIVIALHVLGDDEIVNRDGKASLLSLVTAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHILVGTAQGLHKLRTSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSSAAPVNLRGIDSRGRNGLLASIHRTLSSSSKVLNDDNTGIFDKGTSKASDNSLAKAFIDSTETVQKRSCSLCGPAYALPNSACNHASEESSGGSGKENSMSIVLAQTTKAAPSASVLPARKSPELKPGWPLLHRTISSGRQSPVRSLVRQISVVQWAMQLPSRNLWHAGDHVHRPASSVPDHHQSLALDSESGAIVPLNAQIGIASSPDHNSRKIPKELEGLPEKYSSTCRLFQYQELFLATSNFSPENLVGEGGSSQVYRGYLPDSKELAVKILKPSDDVLKEFLLEIEIITPLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSKKNALVFGWNERYKVAVGVAEALDYLHNRDAQRVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASSSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISGDYPKGQESLVMWATPILNSGKVAQLLDPSLGSNYDQDQMERMVLAASLCIRRAPRARPQMSRITKLLQGDDDVIRWARSEADASKAIETNDDEGCATSNLQSHLNLAFLDVEDDSLSMCSIEQNVSLEDYLKGRWSRSSSFD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2758 758 FunFam Putative receptor-like serine/threonine-protein kinase 487 699 - -
Acco05g2758 758 SUPERFAMILY Protein kinase-like (PK-like) 393 689 IPR011009 -
Acco05g2758 758 CDD USP_Like 21 153 - -
Acco05g2758 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Acco05g2758 758 Gene3D Transferase(Phosphotransferase) domain 1 487 705 - -
Acco05g2758 758 Pfam Universal stress protein family 20 153 IPR006016 -
Acco05g2758 758 SMART serkin_6 412 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2758 758 PANTHER OS08G0249100 PROTEIN 81 703 IPR046958 -
Acco05g2758 758 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 153 - -
Acco05g2758 758 ProSiteProfiles Protein kinase domain profile. 412 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2758 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Acco05g2758 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 381 486 - -
Acco05g2758 758 Gene3D HUPs 20 156 IPR014729 -
Acco05g2758 758 Pfam Protein kinase domain 415 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2758 758 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Acco05g2758 758 Gene3D Phosphorylase Kinase; domain 1 377 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2758 Acco-ChrAcco05 42823583 42827032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2758 399 679 Trihelix Transcription Factor Family AT1G68690 47.203 1.61e-78 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco05g2758 Pkinase 6.2e-44 CL0016