Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2745 ATGGAAAGGCAGCGTGAGCAAGACAGTGAAGCAGCTATCTCATCGAGGGACGTTGAATTCAGAAGCACTCGTATAGCACCAGCACCTAATGTTGATGCTGCTTTCTCCACTCATAAGAAACCTCGGTGGAGGGACTTCCTATCCTATGTTGGTCCTGGTTTTCTGGTTTCCATGGCTTACCTTGATCCTGGAAACTTGCAAACTGATTTGCAAGCTGGAGCCAACCACGGATTTGAGCTGCTATGGGTGATACTTATTGGGCTACTTTTTGCTCTCATTATTCAGTCATTGGCGGCAAATCTTGGCGTAACAACAGGGAAGCACCTTTCAGAGTTATGTAAAGTGGAGTACCCTTCTCTAGTGAAGTACTGCTTATGGTTGCTGGCTGAGAGTTGTGTCATAGCAGCAGATATAGCCGAAGTTGTTGGCACAGCCTTTGCACTCGACTTACTGTTCCACATCCCACTATGGGCGGGAGTTCTCTTGACCGGCTTCTCCACTCTTTTGCTTCTTGGTCTCCAGAGATTTGGCGTTAGGAAGCTGGAATTGCTGATATCAATTCTGGTATTTATAATGGGAGGATGCTTCTTTGTGGAAATGGGCTATGTAAAACCATCAGCTTCTGGTGTATTGAAAGGAATGTTTGTCCCCAAACTAAGTGCCGCTGGAGCGACTGGTGACGCCATTGCCCTTTTCGGAGCACTCATCATGCCGCACAACCTCTTTCTCCACTCTGCTCTCGTGCTCTCTAGAAAAGTACCCACCTCTGTCCGTGGCATCAATGACGCTTGCAGATACTTTCTAATAGAAAGTGGATTTGCTCTGTTTTTAGCATTTCTAATAAACGTAGCAATAGTTTCAGTATCGGGCACGGTATGCTCTGCAAATAATCTTTCTGCTCAAGATACAGAAAGATGCAACGATCTCTCCCTTAATTCTGCATCTTATCTTCTCAAGAATGTGTTGGGAAAGTCCAGCTCAACAGTTTATGCCATAGCACTTTTGGCCTCTGGACAAAGCTCTACTATCACTGGAACATATGCAGGGCAGTACATCATGCAGGGATTCTTGGAATTGAGGATGAAAAAATGGATGCGGAATTTGATGACTAGGAGTGTTGCTATAGTACCTAGTCTTGTTGTTGCTGTTATTAGCGGACCTTCGGGTGCAAGCCGCCTAATTATCATTTCCTCGATGATACTTTCGTTTGAGCTGCCATTTGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCCCCAAGATGGGACCTCACAAGAATTCTATAATTATCATTGTGATTTCATGGATCCTAGGATTCGGAATCATTGGCATAAACGTGTATTACCTAAGCACAGGTTTTGTGGATTGGTTAATTCACAGCAGCCTCCCAAAAGTGGCAAACGTATTTATTGGGATCATAGTATTCCCTCTTATGGCCATCTATGTTGCTGCCGTTATCTACCTCACCTTCAGAAAAGACACCGTCAAAACATTCATAGATACTCAGAACGATTCTCAAGTGCCAACCCACATGGAATTGGGTCCAATTGCTTTTAGAGAAGATTTAAGGGACATCCAACTTCCACATTAA 1593 0.4438 MERQREQDSEAAISSRDVEFRSTRIAPAPNVDAAFSTHKKPRWRDFLSYVGPGFLVSMAYLDPGNLQTDLQAGANHGFELLWVILIGLLFALIIQSLAANLGVTTGKHLSELCKVEYPSLVKYCLWLLAESCVIAADIAEVVGTAFALDLLFHIPLWAGVLLTGFSTLLLLGLQRFGVRKLELLISILVFIMGGCFFVEMGYVKPSASGVLKGMFVPKLSAAGATGDAIALFGALIMPHNLFLHSALVLSRKVPTSVRGINDACRYFLIESGFALFLAFLINVAIVSVSGTVCSANNLSAQDTERCNDLSLNSASYLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLELRMKKWMRNLMTRSVAIVPSLVVAVISGPSGASRLIIISSMILSFELPFALIPLLKFSSSSPKMGPHKNSIIIIVISWILGFGIIGINVYYLSTGFVDWLIHSSLPKVANVFIGIIVFPLMAIYVAAVIYLTFRKDTVKTFIDTQNDSQVPTHMELGPIAFREDLRDIQLPH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2745 530 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 44 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 178 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 153 172 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 125 151 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 228 251 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 PRINTS Natural resistance-associated macrophage protein signature 398 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 Pfam Natural resistance-associated macrophage protein 67 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 NCBIfam Nramp family divalent metal transporter 51 417 - -
Acco05g2745 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 24 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco05g2745 530 Hamap Divalent metal cation transporter MntH [mntH]. 30 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2745 Acco-ChrAcco05 42704235 42714024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2745 39 530 Inorganic Solute Cotransporters AT1G15960 58.835 0.0 610