Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2740 ATGGCATCGGCAGATCTACAGCTACCTCCCGGCTTCCGATTCCACCCGACGGATGAGGAGCTGGTGATGCACTATCTCTGTCGTAAATGTGCATCGCAGCCAATAGCCGTTCCGATCATTGCAGAAATTGATCTTTACAAGTATGATCCTTGGAACCTTCCTGGCCTGGCTCTGTATGGTGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGATCCGCGGGGACCGGCTACTGGAAGGCAACCGGAGCGGATAAGCCCATCGGCCATCCCAAACCGGTTGGGATCAAGAAAGCTTTGGTGTTTTATGCCGGAAAAGCGCCCAAAGGCGAGAAATCAAATTGGATTATGCATGAGTACCGTCTCGCCGATGTGGATCGCTCCGCTCGCAAAAAGAATAGCTTGAGGCTTGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGTGCCATCGAGAAGCAGCCGAGTCCTCGTGATGTGTGCCAGATAACGGCTGAGTCATCGGAAATCGAGGACAAGAAGCCGCTGCATTTCAACCGGGGCGGCGCACTTCCTCCTCCGCTGCCACCTGCTCAAGTGCCTTCGGCGGTCACCGATTACATGCATTTTGACAATTCGGATTCAATCCCAAAGCTGCACACGGATTCAAGCTGTTCGGAGCAAGTGGTGTCGCCGGAGTTCGCTAGTGAGGTGCAGAGCGAGCCCAAGTGGAATGATTGGGAGAAGAACCTTGATTTTCCGTATAATTACATAGATGGCACTCTGGGCAATAATGGCTTTGGATTTCAGGGCGGTGTTCAGATGTCGCCGTTACAAGATATGTTCATGTACCTGCAGAAGCCCCTCTGA 882 0.5249 MASADLQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWNLPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKSNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPSPRDVCQITAESSEIEDKKPLHFNRGGALPPPLPPAQVPSAVTDYMHFDNSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNDWEKNLDFPYNYIDGTLGNNGFGFQGGVQMSPLQDMFMYLQKPL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2740 293 FunFam NAC transcription factor 17 162 - -
Acco05g2740 293 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Acco05g2740 293 PANTHER NAC TRANSCRIPTION FACTOR 56 8 213 - -
Acco05g2740 293 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Acco05g2740 293 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Acco05g2740 293 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2740 Acco-ChrAcco05 42679494 42680964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2740 6 292 NAC Transcription Factor Family AT1G01720 73.649 5.66e-151 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco05g2740 NAM 3.5e-38 No_clan