Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2739 ATGTCAAAGTCTACATCTCCGGAACTGCCACGGTCCATTTATTCTTCATCTTGGACTAGGGAAACTAAAGTGGCTGAAGAAATGGATGATCCGGCATCTACAATAACTACAGTGGCCAATTTTGTTGAGCAACTGCATGCCAACTTGTCATCACCACTTGAGAAGGAATTCATCACAGCACGTCTGCTAGGCATTGCCAGGACAAGAAAGGATGCTAGAAGACTTATTGGTTCTCATGCCCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAATGGAACGCCTGTGGCAAAAGTTAATGTTGCTGCCACTCTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTGAAAGTACTTCTTGGTGGTTGTATTCCACCTTTACTGTCACTTTTGAAGTCTGAAACCACTGAGGCAAGGAAGGCCGCAGCTGAAGCAATATATGAAGTTTCCTCAGGTGGCCTTTCAGATGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACTTTATGGGATCAACTAAATCCAAAGAACAAGCAAGACAAAGTTGTGGAGGGTTTCATTACCGGGGCATTGAGAAATCTGTGTGGGGATAAAGACAGATACTGGAAAGCTACATTGGAAGCAGGGAGTGTGGATATTACTGTAGGGCTCTTGTCAGCAAACAATGCTGTTGCTCAATCAAACGCAGCTTCTCTGCTAGCACGTCTGGTGCTGGCTTACAGTGATAGCATCCCCAAAGTAATAGAATCTGGTGCAATCGATGCTTTACTTCGGCTTGTTGGTCAGAAAAATGATATTTCTGTCCGAGCAAGTGCTGCTGATGCTCTAGAGGCCCTTTCATCAAAGTCAACTAAGGCAAAGGAAGCCATTGTCAGTGCAGATGGTGTTCCAATTCTCATTGGGGCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGGAAATGGCCAGGATCTGCAGGAGCATGCAACTCAAGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATAATATATCTTGGAAAACTCTCCCATTCTCCTCGCCTAGCTGCACCAGTTGGTGATATAATTGGAGCTCTTGCTTATACACTGATGGTGTTTGAAGACAAACATGATGTTGATGGGAAGCATTTTGATGCTGCTCAAATTGAGGATATTCTTGTGACACTATTAAGGCCTCGAGATAACAAGTTGATTCAAGAGAGAGTATTAGAGGCCATGGCTAGTCTATATGGAAACATCTATCTCTCGAAATGGCTTGAGCATGCAGATTCAAAAAAGTTTCTTATTGGACTCATTACTATGGCTGCTGCTGATGTGCAGGACTATCTCATACTCTCCTTGACAAGCTTGTGCTGTGATAGGGTAGGAATATGGGAAGCCATAAACAGAAGAGAAGGCATCCAGTTACTTATCTCAATGCTGGGACTTTCCAGTGAGCAGCATCAAGAGTATGCAGTTCAGTTGCTATCGATTTTAATTGACCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAGAGACAGGATCGCAGAAGGCTAGAGAGGAAGCTGCTCATATTCTGTGGAACCTGTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGATTGGTGGACAAAGAGGACAAGAAGCTTCTGCCATGGCACTCATTAAGCTTGTGCGAATAGCTGATTCTGCTACCATTAATCAATTGTTGGCATTGCTTCTTGGGGACACGCTAGGCTCAAAGGTCCATATAATTCGAGTCTTAGGTCATGTACTTACTATGGCTTCACAGATGGACCTCCTGCAGATGGGTTCTGCGGCTAATAAGGGGTTGAAATCTCTAGTTCAGGTTCTCAACTTATCAGATGAGGAAAGCCAGGAACATGCGGCTTCCGTCCTAGCTGATTTATTCAGTGCAAGACAAGACATTTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCCTTGCATGAAGCTTTTGACCAGCAAAAATCAAATTGTTGCAACTCAGTCAGCTCGAGCATTGGGTGCTCTATCTCGTCCAGCACACAGCAGATCTGCCAATAAGATGCCTTATTTTGGAGAGGAGGATGTCAAACCATTAATTAAATTGGCTAAAACTTCCTCTATTGATGCTGCTGAAACTGCAGTTGCTGCACTGGCCAATCTTCTCTTTGATACATCTATTGCTGCTGAAGCACTGGCTGGAGATCTTGTTTCATCTTTAACTAGAGTTCTGGCAGAAGGAACCTTGGAAGGTAAACAGAATGTGTCACGAGCACTTCATCAGTTGCTGAAGCATTTTCCTGTTGGTGATATTCTCAAGGGAGATGCTCAGTACCGTTTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAAGATGGATGAAACTGATGCTGCTGATGCTTTAGAAGTAGTTGCACTGCTAGCCCGGACAAAACAGGGCGACAATTTCACTTGCACTCTGTGGTCTGCATTTGCAGAAACACCATCCAATTTAGAACCTCTTGTACACTGCCTGGCTGAGGGGCCTCCCCAAGTGCAGGATAAGGCAATTGAAATTCTGTCTAGACTTTGTGGTGATCAATTAGTTGTTCTTGGGGATTTGTTGGCTGCTATGTCTAGATCCATTAGTTCATTAGCAGATAGAATGATGAACTCCTCCAGTTTAGAAGTAAAAGTTGGAGGGGCTTCCTTACTTATTTGTGCTGCAAAGGAGCATAAAGAGCAGTCAATGAATGTACTTGACACTTCTGGGCATCTAAAACCATTAATATATACTTTAGTAGATATGCTGAACCAGAACTCTAGCTGTTCATTGGAGGTTGAAGGACAAACTTCTAGAAAGTTTATGGTGAAGAGTGAATTTCAGGAAGTTGATCTTGATATTCCTGATCTAGCCAAAGTCTCGGGTGTTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTTCCAATGTAAAGAACAAACTCGCAATTATGGAAGCTGGTGGACTTGAGTGTCTCTCTGAAAAGCTTGCACACCATACTTCCAATCCACAGGCAGAATTTGAGGATGCTGAAGGAATATGGATAAGTGCCTTGCTCCTGGCCATTTTGTTTCAAGATGGAAATGTTGTTCTATCTCCAGTAACAATGCACATTTTACCTTCTCTAACTCATTTACTACGATCTGAAGAAGTGGCATATAGATATTTTTCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAGGGGAATAGCTCTTGCTGTTGCAAACTCTGGTGCCGTTGCTGGATTGGTTTATATGATTGGCTACATGGAGTCAGATATACTAAACATTATTGCTTCATCAGATGAATTTTCACTGGTGCGAAATCCTGATCAAGTAGTTTTGAATCACCTTTTTAAAATTGAAGATATAAGATTGGGGTCTACTGCACGAAAATCTATACCTCTCTTGGTGGATCTATTGAAACCTATTGCAGAAAGGCCTAGTGCTCCACCAGTTGCTGTTAAACTCTTGACATGCATTGCAGATGGAAGTGATGCAAACAAAATAATCATGGCTGAAGCAGGCGTTTTGGAAGCTCTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCACTATTTCTGAGTTATTAAGAATACTATTTTGCAATTCTGACCTTATTAAACATGAAGCATCAGCAAGTTCCCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTTATGAACTTTTTGATGCCGAGAGTATTAGAAACTCAGAATTAGCTAAACAGGCCATTCAGCCTCTGGTTGACATGCTCAATACAACATCAGGTAGCGAGCAGGAGGCTGCTCTAATTGCATTAATCAAATTAACATCTGGAAATTCTTCAAAAGCATCTTTTTTTGCTGATGTAGAAGGGAACCCACTTCAAAGTTTATACCAGATATTGTCTTCCGCTTCATCCTTGGAACTAAAGAGCAATGCTGCACAACTTTGCTTTGTCCTTTTTGCTAGCAGGAAGATTAGAGCTGACCCACTTGCCTCAGAATTCATAGAACCCCTTGTTTCATTGGTACAGTCTGATTCGGGTCTGGCAATAGAAGCTGGGATTTTTGCTTTTGAGAGATTATTGGAAGATGAAGAACATGTGGAGCTTGCAGTAGCCCACAATGTTGTGGATCTCCTCGTTAGTTTGGTTGTGGGTTCCAACTATCAGCTGATTGAAGCTACCATATCTGCTCTGATCAAATTGGGCAAAGATAGGACGCCATGCAAACTAGACATGGTTAAAGCTGGCATTCTTGATAATTGTCTGAAGTTACTTGAATTTGCACCTAGCTCACTGTGCTCCACAATTGCTGAACTATTCCGCATTTTGACAAATAGTAGTGCAATTGCGAGAAGTTCAGCAGCTGCAGAAATTGTAGAACCCCTTTTTCAAGTTTTGCTCCGTCTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATATTGGAGAAGCCACAAAGTCTTTCAACCTTAAAACTAACTCCTAGCCAAGTTATTGAGCCTTTAATCTCATTCCTGGAATCACCATCCCAAGCCATTCAGCAGCTTGGCACTGAACTGTTGTCTCATCTTCTTGCACAGGAACATTTCCAGCAAGATATTAAAACAAAGAATGCTGTTGTTCCTCTTGTTCAACTTGCAGGGATTGGAATACTGAACTTACAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGAATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTGGTTCTTTCTAATGTACTATCTTCCAATGCTGATTATTATTTTAAAGTTCCTGTGGTAGTTCTTGTAAAACTGTTGCACTCAATGGTTGAGAGTACCATTAGCATGGCCCTTAATGGCCTAATGATTCATGAAAGAAGTGATGCTTCAAGCGCTGAACAGATGATGGAAGCTGAAGCTATAGATATTCTGTTAGACCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGCAGATTACTTGAAGCTCTATCCAACAATGTGAAAATAAGAGAGATGAAGGCATCTAAGTATGCAATAGCACCATTATCTCAATATCTGTTAGATCCGCAGACCAGATCGCCTTCTACCAAGCTTCTTGTTGCTTTAGCTTTGGGAAATATTTCCCAGCATGAAGGACATGCTAGAGCTGGTGGTTCTGTTTCTGCTTGTCGTGCATTGGTAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGGTGATGGTTGCTATTTGTGCGTTGCAAAACTTTGTCATGAACAGCAGGACTAACAGGCGAGCTGTTGCAGAAGCTGGTGGTATATTGGTGATTCAGGAATTACTGCTGTCTACAAATCCAGATGTTGCAGGACAAGCAGCATTGCTGATCCGATTTTTATTTTCTACTCACACACTACAAGAATATGTGTCAAATGAGTTGATCAGATCTCTGACAGCTGCACTGGAAAGAGAGCTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACTCTGCATGTCATATTCACAAACTTCCCTAAGCTCCACGTGTCTGAAGCAGCAACTCTTTGCATTCCTCATTTGATAGGGGCGCTCAAATCTGGTAGTGAAGTGGCTCAAGACTCTGTACTAGAATCCTTGTGCTTGCTAAGACATTCTTGGTCAACCATGCCAATAGATATATCGAAATCTCAGGCTATGATTGCTGCTGAAGCCATTCCCATCCTGCAAATGCTCATGAAAACCTGTCCCCCAAATTTCCATGAGAGAGCAGATAGTCTTCTGCATTGTTTACCAGGTTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAGCAAGCTATGGGAAGTACAAATGCGTATTGCCAGTTAACAATAGGCAATGGTCCTCCTAAACTAACCAAGGTTGTGAGTCACAGTATTTCGCCAGAATGGAAAGAAGGATTCACGTGGGCATTTGATGTACCTCCAAAGGGCCAGAAGTTGTACATCGTATGCAAAAGCAAGAATACCTTTGGCAAGGCAACTCTTGGAAGAGTTACCATACAAATTGATAAAGTGGTAAACGAGGGAGTTTACAGTGGAATATTCAGTCTTAATCACGACAGAAACAAAGATGGTTCTTCCCGAACTCTTGAAATTGAGATTATATGGTCCAACAGGATCTCTGATGACGACTTCTGA 6402 0.4217 MSKSTSPELPRSIYSSSWTRETKVAEEMDDPASTITTVANFVEQLHANLSSPLEKEFITARLLGIARTRKDARRLIGSHAQAMPLFISILRNGTPVAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSETTEARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDKVVEGFITGALRNLCGDKDRYWKATLEAGSVDITVGLLSANNAVAQSNAASLLARLVLAYSDSIPKVIESGAIDALLRLVGQKNDISVRASAADALEALSSKSTKAKEAIVSADGVPILIGAIVAPSKECMQGNGQDLQEHATQALANICGGMSSLIIYLGKLSHSPRLAAPVGDIIGALAYTLMVFEDKHDVDGKHFDAAQIEDILVTLLRPRDNKLIQERVLEAMASLYGNIYLSKWLEHADSKKFLIGLITMAAADVQDYLILSLTSLCCDRVGIWEAINRREGIQLLISMLGLSSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLETGSQKAREEAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKIGGQRGQEASAMALIKLVRIADSATINQLLALLLGDTLGSKVHIIRVLGHVLTMASQMDLLQMGSAANKGLKSLVQVLNLSDEESQEHAASVLADLFSARQDICDSLLATDEIVLPCMKLLTSKNQIVATQSARALGALSRPAHSRSANKMPYFGEEDVKPLIKLAKTSSIDAAETAVAALANLLFDTSIAAEALAGDLVSSLTRVLAEGTLEGKQNVSRALHQLLKHFPVGDILKGDAQYRFTVLALVGSLSAMKMDETDAADALEVVALLARTKQGDNFTCTLWSAFAETPSNLEPLVHCLAEGPPQVQDKAIEILSRLCGDQLVVLGDLLAAMSRSISSLADRMMNSSSLEVKVGGASLLICAAKEHKEQSMNVLDTSGHLKPLIYTLVDMLNQNSSCSLEVEGQTSRKFMVKSEFQEVDLDIPDLAKVSGVTVALWLLSIIASSNVKNKLAIMEAGGLECLSEKLAHHTSNPQAEFEDAEGIWISALLLAILFQDGNVVLSPVTMHILPSLTHLLRSEEVAYRYFSAQAMASLVCNGDRGIALAVANSGAVAGLVYMIGYMESDILNIIASSDEFSLVRNPDQVVLNHLFKIEDIRLGSTARKSIPLLVDLLKPIAERPSAPPVAVKLLTCIADGSDANKIIMAEAGVLEALTKYLSLSPQDSTEATISELLRILFCNSDLIKHEASASSLNQLIAVLRLGSRNARYSAARALYELFDAESIRNSELAKQAIQPLVDMLNTTSGSEQEAALIALIKLTSGNSSKASFFADVEGNPLQSLYQILSSASSLELKSNAAQLCFVLFASRKIRADPLASEFIEPLVSLVQSDSGLAIEAGIFAFERLLEDEEHVELAVAHNVVDLLVSLVVGSNYQLIEATISALIKLGKDRTPCKLDMVKAGILDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSAAAEIVEPLFQVLLRLDFDLWGQHSALQALVNILEKPQSLSTLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDIKTKNAVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLSSNADYYFKVPVVVLVKLLHSMVESTISMALNGLMIHERSDASSAEQMMEAEAIDILLDLLRSHHCEEASGRLLEALSNNVKIREMKASKYAIAPLSQYLLDPQTRSPSTKLLVALALGNISQHEGHARAGGSVSACRALVSLLEDQPTEEMVMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSTNPDVAGQAALLIRFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFTNFPKLHVSEAATLCIPHLIGALKSGSEVAQDSVLESLCLLRHSWSTMPIDISKSQAMIAAEAIPILQMLMKTCPPNFHERADSLLHCLPGCLTVTIKRGNNLKQAMGSTNAYCQLTIGNGPPKLTKVVSHSISPEWKEGFTWAFDVPPKGQKLYIVCKSKNTFGKATLGRVTIQIDKVVNEGVYSGIFSLNHDRNKDGSSRTLEIEIIWSNRISDDDF 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2739 2133 Gene3D - 35 344 IPR011989 -
Acco05g2739 2133 Gene3D - 846 1145 IPR011989 -
Acco05g2739 2133 Pfam C2 domain 2006 2105 IPR000008 -
Acco05g2739 2133 Pfam Armadillo/beta-catenin-like repeat 505 540 IPR000225 GO:0005515
Acco05g2739 2133 SUPERFAMILY ARM repeat 70 309 IPR016024 -
Acco05g2739 2133 SUPERFAMILY ARM repeat 1584 2003 IPR016024 -
Acco05g2739 2133 SMART arm_5 1583 1623 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 617 662 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1414 1454 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 751 791 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1541 1582 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 111 151 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 457 499 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 664 705 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1456 1496 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 287 335 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1832 1872 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1286 1327 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 244 285 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 710 750 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 543 583 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 501 541 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1204 1244 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1744 1788 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 1013 1062 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 201 242 IPR000225 GO:0005515
Acco05g2739 2133 SMART arm_5 156 200 IPR000225 GO:0005515
Acco05g2739 2133 SUPERFAMILY ARM repeat 857 1126 IPR016024 -
Acco05g2739 2133 Gene3D - 1344 1604 IPR011989 -
Acco05g2739 2133 Gene3D - 372 624 IPR011989 -
Acco05g2739 2133 Gene3D C2 domain 2006 2131 IPR035892 -
Acco05g2739 2133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2004 2109 IPR035892 -
Acco05g2739 2133 Gene3D - 1147 1343 IPR011989 -
Acco05g2739 2133 Gene3D - 625 841 IPR011989 -
Acco05g2739 2133 Gene3D - 1608 2005 IPR011989 -
Acco05g2739 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1800 1843 IPR000225 GO:0005515
Acco05g2739 2133 SUPERFAMILY ARM repeat 1173 1542 IPR016024 -
Acco05g2739 2133 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 15 2127 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Acco05g2739 2133 SMART C2_3c 2006 2102 IPR000008 -
Acco05g2739 2133 ProSiteProfiles C2 domain profile. 1986 2103 IPR000008 -
Acco05g2739 2133 SUPERFAMILY ARM repeat 443 794 IPR016024 -
Acco05g2739 2133 CDD C2 2007 2097 - -
Acco05g2739 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 554 IPR000225 GO:0005515
Acco05g2739 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2739 Acco-ChrAcco05 42651809 42660132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2739 472 700 U-box Gene Family AT2G23140 29.958 2.34e-10 63.9