Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2730 ATGGATTCTCTGTGTGCCTGTATGCAGACGCAGACGGTGGCGACTAGCGATAGTTCCTTAACGCTGAGAATGAAGATGGAAGCCAAATCTAATGTTGTTGAGGATAGTGTTAAGCTTCAGAAGGAACAAGATCTGCAACATTTCCATGTCTTAGCCGTCGACGACAGCCTCATCGACCGGAAGCTTCTCGAGAAGCTCCTTCAGGTCTCTTCTTGCAAAGTGACTAGTGTGGACTCCGGCGACAAGGCTTTGAAATATCTTGGTCTTCTCGATGATCTTGATGATGCTTCTCCAACTTGTTCAGAATCATCACCTTCTTCTCCCCAGTCACCCCAACAAGAGGAAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCTGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGGATCTTCTTGGAAACACGTGCCAGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATTAGCATGTGCTTGGAAGGAGGAGCAGAGGAGTTTCTACTGAAGCCACTGAAGTTATCAGACCTGAAGAAGCTTCAGCCGTACCTGGTGAAATCCAAATCCCACGAGAACCATAACAATAAGAATAATAACAATGAGGATGATAATAATTCATCAAGCGAACAAGAATCTGGGAATAGTGATGCAGCAACTGACAATGACTGCAATCCCAACAGTAATAACAACACTTGTATTTCCAAAAGGAAGGCCATGTCTCCTCAGCCTTCTGACAGATCCAGAGCCAAATTCAAAGGCTTAGAGGTCGTGTAA 789 0.4474 MDSLCACMQTQTVATSDSSLTLRMKMEAKSNVVEDSVKLQKEQDLQHFHVLAVDDSLIDRKLLEKLLQVSSCKVTSVDSGDKALKYLGLLDDLDDASPTCSESSPSSPQSPQQEEMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCLEGGAEEFLLKPLKLSDLKKLQPYLVKSKSHENHNNKNNNNEDDNNSSSEQESGNSDAATDNDCNPNSNNNTCISKRKAMSPQPSDRSRAKFKGLEVV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2730 262 MobiDBLite consensus disorder prediction 204 245 - -
Acco05g2730 262 SMART REC_2 48 186 IPR001789 GO:0000160
Acco05g2730 262 PANTHER TWO-COMPONENT RESPONSE REGULATOR 48 226 IPR045279 GO:0009736
Acco05g2730 262 Pfam Response regulator receiver domain 114 184 IPR001789 GO:0000160
Acco05g2730 262 ProSiteProfiles Response regulatory domain profile. 49 190 IPR001789 GO:0000160
Acco05g2730 262 SUPERFAMILY CheY-like 47 192 IPR011006 -
Acco05g2730 262 MobiDBLite consensus disorder prediction 192 262 - -
Acco05g2730 262 Gene3D - 49 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2730 Acco-ChrAcco05 42604078 42606429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2730 47 259 Response Regulator Gene Family AT3G57040 46.383 2.33e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco05g2730 Response_reg 2.8e-14 CL0304