Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2725 ATGGCGGATTCAAGGGTGGAGACCATATCAAGACTAGCACAATGGAAAATTGACAACTTCGGACCTTGCTCCTACAAGAAATCCGATCCTTTCAAAGTCGGAATCTGGAACTGGTATTTATCTATAGAGAGGAATAGGTACCTGTACATACATCTATTTCCTGAGCCTTCCCGGGCTTCTAAGGAACATCCACCAATTGCTCGATTCATTCTTCGAGTTTCTAATACCGGCTCTTCCCGCAGATTCTACATTTCTCCTGTTCATGAACGACTGCTTAGAACATGTGACGACTTTGTTTGGCCCGTGGATACTACATTTGTTGGTCGTTTCATTATTGATGTTGAATTCCTTGACCTGAAGATCTGTCCTCTGAATGGTGGAGAAGCTAGTTCTATATGGCCGTCTGATGGAAAAGTGCAATCTGTTGCTGCGCAAAGTGCCCTCCAATGCCTCTCTCGCATGCTTGACGAGGGTATACATGCTGATCTGACCATTAACACTGTAGAAGGTGCATTGAGAGCCCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCACCACAACCTGAAGGAAAAAGAATCATCCACGATCCACATTGAAGACTTCTCACTAGAATCTTGCACGGCTCTTCTGAGTTACTTATATGGCACAATAAAGCAAGAAGATTTCTGGAAGCACCGGCTCGCGTTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTAAAGATACCTGTGAGGAAAGCTTATTGGAAGATCTTAACTCGGGAAATGTCCTCGAGAGGCTACACGAGGCTTGGCTTTATCAGCTGCCCAAGTTGAAGAAAGGGTGCTTGACCTTCCTATTTGATTTTGGTAAGATATATGACGTACGAGAAGAAATAAATAACTTCTTCAGACATGCTGATAGGGAGCTGATGATCGAGATGTTTCAGGAGGTGCTTACAATTTGGAAACCAGTTTAG 981 0.4363 MADSRVETISRLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRASKEHPPIARFILRVSNTGSSRRFYISPVHERLLRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNGGEASSIWPSDGKVQSVAAQSALQCLSRMLDEGIHADLTINTVEGALRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDFSLESCTALLSYLYGTIKQEDFWKHRLALLGAANKYDITGLKDTCEESLLEDLNSGNVLERLHEAWLYQLPKLKKGCLTFLFDFGKIYDVREEINNFFRHADRELMIEMFQEVLTIWKPV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2725 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Acco05g2725 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Acco05g2725 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Acco05g2725 326 CDD MATH 15 101 IPR002083 GO:0005515
Acco05g2725 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Acco05g2725 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Acco05g2725 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Acco05g2725 326 SUPERFAMILY POZ domain 143 257 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2725 Acco-ChrAcco05 42551642 42553761 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco05g2725 BTB 4.6e-22 CL0033