Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2721 ATGGTGTTCAATAATATTTTGAAGTTTATCATTCATTTGGAATTTGCAATTACAATTTTAATAAAGCAAGAGAATCTTGTCTGACGTCGAAATCCATTATTGGACATTGAATCATTTACTCTGATCCGACCTCTTTCATCTTCATCCACCATTCAAAGCGAAGGAGAAGCAAGAAGTCTGTGTGAGATGGCAGGTTTCAGCGGTGACGAAACTGCCCCTTTCTTCGGTTTTCTCGGAGCCGCTGCTGCCCTGGTCTTCTCCTGTATGGGAGCTGCTTATGGAACTGCAAAGAGTGGAGTAGGCGTGGCTTCCATGGGGGTTATGCGGCCTGAGCTGGTCATGAAATCTATTGTTCCAGTGGTTATGGCAGGAGTGCTGGGTATTTATGGACTAATTATAGCTGTTATTATTAGTACTGGGATAAACCCCAAGGCTAAATCATACTATCTCTTTGATGGGTATGCCCACTTGTCATCTGGCCTTGCTTGTGGCCTTGCTGGACTCTCTGCTGGAATGGCAATTGGAATTGTTGGTGATGCTGGAGTTCGGGCAAACGCCCAGCAGCCAAAGCTGTTTGTTGGTATGATTCTTATATTGATCTTTGCTGAAGCTCTTGCTCTCTATGGCCTCATCGTGGGTATCATTCTCTCATCCCGAGCAGGCCAGTCTCGTGCTGATTGA 681 0.4523 MVFNNILKFIIHLEFAITILIKQENLVXRRNPLLDIESFTLIRPLSSSSTIQSEGEARSLCEMAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2721 226 Pfam ATP synthase subunit C 158 216 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco05g2721 226 Pfam ATP synthase subunit C 78 137 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco05g2721 226 PRINTS Vacuolar ATP synthase 16kDa subunit signature 195 218 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco05g2721 226 PRINTS Vacuolar ATP synthase 16kDa subunit signature 117 141 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco05g2721 226 PRINTS Vacuolar ATP synthase 16kDa subunit signature 168 194 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco05g2721 226 PRINTS Vacuolar ATP synthase 16kDa subunit signature 91 115 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco05g2721 226 SUPERFAMILY F1F0 ATP synthase subunit C 75 138 IPR035921 -
Acco05g2721 226 NCBIfam V-type ATPase subunit C 74 182 IPR011555 GO:0033179|GO:0046961|GO:1902600
Acco05g2721 226 FunFam V-type proton ATPase proteolipid subunit 72 223 - -
Acco05g2721 226 CDD ATP-synt_Vo_c_ATP6C_rpt1 74 141 - -
Acco05g2721 226 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 65 222 - -
Acco05g2721 226 Gene3D - 72 223 IPR035921 -
Acco05g2721 226 SUPERFAMILY F1F0 ATP synthase subunit C 148 217 IPR035921 -
Acco05g2721 226 CDD ATP-synt_Vo_c_ATP6C_rpt2 150 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2721 Acco-ChrAcco05 42536385 42539362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2721 63 226 Primary Pumps ATPases(2) AT2G16510 98.171 3.79e-110 311