Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2696 ATGTCTCTGAGCCCTCCTCGCCCAACAATAATAACCTATCAGCTCTACTGGTGCTTCCGATGTAATCGTCTGGTGAGGCTCTCCCCCTCTCACCTTATCTGCCCTCGTTGTTTTCAAAGCTTCCTCTGTGAATTCAACTTTCCAACTCCCTCACTCCTCGCCATCCCTTCCCCTCAAGCTCGTTTGCTCGATGCACTCTCTCTCATGCTCCACCCTCCCGAACGTCAAGGCCCAACTCCTGACTACCCACGTGTCGAAATTCCGGTTCGTCGTATAAGACGTCCCCGACATCATAGTTTTGATGCCAGGGTTGGTGCTTTCGACCCAGAACCAGAGACCCAACCTCGTCCTCGAACTTGGGTTGTTGTTCCACCTGGTGACCGTTCCAACTCGTTCGAACGGATTCCTCGGCTGCAGGATCCAATCCCACGACGGGCTGATCTGAGAGATTACTTTTTCGGGCCGGGGTTGGATGAACTGATTGAGCAACTGACGGAAAATGATCGGCAAGGCCCGCCTCCGGCGCCGGACAGAGCTATCGAAGCAATCCCGACGGTGAGAATAATGGAGAGCCATTTGAAGGAGAACCCTCATTGCCCTGTTTGTCAGGAGGAGTTTGAGGTGGGTGGGGAAGCAAGGGAGTTGGCCTGCAACCATATATATCATTCTGATTGTATCGTGCCATGGCTCAAGCTCCACAATTCTTGCCCTGTTTGCCGCCACAAGGTAACCGTGCCTTCTGACTACACCGACTCAAGCGACGGTGGCGGTGGCAGGGTGCGGCGGTGTTTGAGGTGGGTTCAGTTGGCTTCACTTTGGCCTTTCAATGGAAGGTTCCGACGGGTTAATCCTGAACGCTAG 861 0.5389 MSLSPPRPTIITYQLYWCFRCNRLVRLSPSHLICPRCFQSFLCEFNFPTPSLLAIPSPQARLLDALSLMLHPPERQGPTPDYPRVEIPVRRIRRPRHHSFDARVGAFDPEPETQPRPRTWVVVPPGDRSNSFERIPRLQDPIPRRADLRDYFFGPGLDELIEQLTENDRQGPPPAPDRAIEAIPTVRIMESHLKENPHCPVCQEEFEVGGEARELACNHIYHSDCIVPWLKLHNSCPVCRHKVTVPSDYTDSSDGGGGRVRRCLRWVQLASLWPFNGRFRRVNPER 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2696 286 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Acco05g2696 286 Pfam Ring finger domain 198 240 IPR001841 -
Acco05g2696 286 SMART ring_2 199 239 IPR001841 -
Acco05g2696 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 246 IPR013083 -
Acco05g2696 286 FunFam E3 ubiquitin-protein ligase RING1-like 163 246 - -
Acco05g2696 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 133 242 - -
Acco05g2696 286 MobiDBLite consensus disorder prediction 103 125 - -
Acco05g2696 286 SUPERFAMILY RING/U-box 179 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2696 Acco-ChrAcco05 42346804 42347664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2696 124 275 C3H Transcription Factor Family AT1G68180 36.129 1.51e-27 105