Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2690 ATGGCCATGCCCATGCCTATTGACATGTATGCTATCCCTGAGCTCCACTTTTCCGACTACGCCGCCGCTACTTCTTCCGACGAGGACTGTAACTATTGGAACCACTGGTCACCCGTCGTCAACTGGGACGCCCTCACTTGTGGGCCCGGTCATGAAGGCTTCCACGACCTCATGGAAACCATGATGGACGACACAGCCGGTGTAATGAGCCCCCAAGCAGATCCCAGCGTGGAAGAGGGAGGATGTAGCAACTCTGCCACCACGACGGAGGTGACCACGGCCGACGATGAAGTAGACGGCGGTTTGGAGGATTTCAATAAGGGCCTGAGACTGGTGCACCTCCTGATGGCTGCCGCCGAGGCTCTCACCGGAGCCAACAACAGCCGTGATCTGGTTATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCGACCAACGGAACCAACATGGAGCGGCTAGCTGCATATTTTACGAATGCCTTGAGGGTCATAGTAGAAGGGGCTCACAGCACTAAGCATTTGAATTGGATCGCCAACAGTGGCGGCAGCGACAACCGTCACCAGACCGACATGCTCACCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACTTAAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTGGAGTCGGTGGCCCACGACAGGCGGGTCCACATCGTCGACTATGACATCATGGAGGGGACCCAGTGGGCCTCCTTCATGCAGGCCCTGGCCTCCCGCAAGGATGGCCCCCATATCAGGATCACAGCCATCTCCAGGACGGGAAGTGCTCGGAGATCCATCGCCACCGTCCAAGAGACTGGCCGTCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCCTTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAGACCTTCCGACCGTCCGCCTTGAAACTGGCTCGCGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCGGGGGAATCGGTGAAGTCGTTTCTCCGGGGAGCGGCGGAGTTGAAGGTGAGGGTGGTGACGTTGGTGGAGGAGGACGGTGGGCCGACGGGAAAAGAAGTGGGGTTTGTGGGGAGGTTCATGGACAGGCTGCACCATTATTCGGCGGTGTATGATTCGATGGAGGCGGGGTTTCCGATGCAGGGTCGGGCGAGAGCGTTGGTGGAGCGGGTATTCTTGGGGCCCCGAATAGCGGCGTCGTTGGCCCGCATATACAGAATGGGAGAATCAGAGAGCGGCTCGTGGGGGGATTGGTTGGGTGAAGAAGGGTTCAGGGGAGTGGACATAAGCTTCGCCAATCACTATCAAGCGAAGCTGTTGCTGGGTTTATTCAACGACGGATATGGATTGGAGGAGATGGGCTGTAAAAATAAGTTGGTTTTGAGTTGGAAATCAAGGCGCTTGCTTTCCGCTTCTGTTTGGACCCCTTTTGTAAATTAA 1476 0.5745 MAMPMPIDMYAIPELHFSDYAAATSSDEDCNYWNHWSPVVNWDALTCGPGHEGFHDLMETMMDDTAGVMSPQADPSVEEGGCSNSATTTEVTTADDEVDGGLEDFNKGLRLVHLLMAAAEALTGANNSRDLVMVILVRLKELVSPTNGTNMERLAAYFTNALRVIVEGAHSTKHLNWIANSGGSDNRHQTDMLTAFQLLQDMSPHLKFAHFTANQAILESVAHDRRVHIVDYDIMEGTQWASFMQALASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSALKLARGEAVVFNCMLHLPHQSYRAGESVKSFLRGAAELKVRVVTLVEEDGGPTGKEVGFVGRFMDRLHHYSAVYDSMEAGFPMQGRARALVERVFLGPRIAASLARIYRMGESESGSWGDWLGEEGFRGVDISFANHYQAKLLLGLFNDGYGLEEMGCKNKLVLSWKSRRLLSASVWTPFVN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2690 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 483 IPR005202 -
Acco05g2690 491 Pfam GRAS domain family 111 487 IPR005202 -
Acco05g2690 491 ProSiteProfiles GRAS family profile. 102 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2690 Acco-ChrAcco05 42316407 42317882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2690 135 488 GRAS Transcription Factor Family AT3G54220 35.813 6.75e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco05g2690 GRAS 2.6e-93 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2690 05 42316407 42317882 Acco05g2690 05 42316407 42317882 ECH