Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2686 ATGGAACCTATCTTTCACTTCTCTCTCCTTCTTCTCTTCTTCTCTGCCATATCCGCTGCTTACACTTTCTCAGAATCCATCAATCCAAATTTCACTGCTACATTTCTTCAATTCATTTACAATTCTGGTGCCTTCTTGTCATCCCGCAATGGAACATTCGAGGCTGCTATATTCAATCCTGGATATCAACAATCCAGATTCTACCTGTGCGTCATACATGTGCCATCCCGCACCATCATATGGTCTGCTAATCGTGACGCTCCCATCTCAAATTCTGATACGATGAATCTGACTACCAAAGGGATCGCTATTTTTGATCACGATAGAAACATCAAATGGTCAACCCCACCATTGAAATCACCAGTATCCGCACTACAACTCACTGAAACGGGCAACCTCGTCTTACTTGATAGTTCCAATGTTTCTCTGTGGGAGAGTTTCCAGCACCCGACAGATACAATTGTCATGGGACAACGCTTGCCTGTTGGGTCATGGCTGTCAAGTGCAATATCAGGCTCTGACTTTTCAACAGGAGACTACAACTTGAGTATAACTTCATCTGATGCAATGCTTCGGTGGCGTGGACAGACATACTGGAAGTTGTCGATGATCTTAAACGCCTTTCAGGATTCAAGTCATATGGTGGAATACATGGCAATAAACAGAACAGCCCTTGATCTCTTTGGAAGTAATGGAACAGTAACAGTGTTTAGGGTGGTCTTGCCCATGGCCGATTTCAGAATTGCCAAACTGGCTGTTAATGGTCAGTTTACTGTCCAAAGCTTTTCCGGTACTAGCTGGGCCCAGGATTTTGTGGGGCCAGATGATGGTTGTGAGACTCCATTTTTTTGTGGCAGATTAGGATTATGTACTCATGGCGCTGCGTCCTCTACACCTTCCTGTTCTTGTCCCCCAAACTTCCATGCAGGCTCAAGTGATGTTCCGGGTTGTGTTCCCAGCAGTGGTTCTTATTCTTCGCCATCTGCGTGTAATTCATCTGTTTATGATAGTGCATCAAATTCTTCATCTGTTTCATATTTGGCACTCGGGGGTGGTATCCAGTACTTTGGCAATACCTACTCTAACACCGTAACATATGTGGTGAGCTTAACTATTTGTCAAGATCTGTGTTCAAGGAATTGTTCGTGCTTGGGATTCTTCTATGAAAATTCGTCTGGGTCCTGCTATATGCTTGAAAATCAGTTGGGTTCTATTATGTCAAGTAGTGGAGGTGCAAGTAACTCGTTGGGCTACATAAAAGTTTTTGGTGCATCTGCTTCTGCTATTGGTCCTCCCACTTCTGAAGAAGATAGGCTTCCTGTGGCTGTTCTGGTGGTAATACCTATTGCTGGATTCATTATTGCTATGGCTCTTGGTTTCCTCTGGCTTAGAAGATATAGAACCTCAAGGGCAAAAGAGAGAGAATTAGACAACTTCAAATCACGTTCTTTTGACGACTTGGAGACCTTCTATATTCCAGGTTTACCAAAAAGGTTTGATTATGAAGAACTTGTGGAGGCTACTGATAATTTCAAGACTCTAATTGGTTCAGGCGGATTTGGTGCGGTGTTCAAGGGGCAACTTCCTGATAAGACCGTGGTGGCGGTGAAGAAAATAGTGAGTCTGGGAAATCAAGGGAAAAAGGATTTCTGCACTGAGATTGCAATTATTGGGAATATTCACCACTTTAATTTGGTGAAACTGAAAGGCTTTTGTGCTGAAGGAAGACAACGTCTGCTGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGCACCCTCTTTGGTGGTGGACCAGCCTTAGAATGGAAAGAAAGGTTCGATATAGCACTCGGAACAGCGCGTGGACTAGCCTATCTGCACGGCGGGTGTGAGCAAAAGATCATTCACTGTGATATCAAACCAGAGAATATTCTCCTGCATGATCACTTTCAGGCTAAGATATCTGATTTTGGACTCTCAAAACTCCTCAGCCCCGAACAGTCTGGTTTATTCACAACAATGAGAGGCACGCGAGGCTATCTAGCTCCAGAGTGGCTTACCAACTCTGCAATCACAGAGAAGACTGACGTTTATAGTTTTGGAATGGTGCTGCTTGAGCTAGTGAGTGGGAGGAAAAATTGTTCAGTAGTGGGGTCACAAAGCCCGAGCAAGGACGAGAGTATGAGTAGCAATTCAGGGACGTCATCAGGGACAGGATTGGTTTATTTTCCACTGTATGCCTTAGAGATGCATGAGCAAGGAAGGTACCTTGAATTGGCAGACCCAAGGCTAGAAGGGCGGGTTTCAAATGAGGAGGTGCAGAAACTAGTGCGTGTAGCCTTGTGCTGTGTTCATGAAGAACCGTCGCTTAGGCCAAATATGGCCGCTGTTGTAGGCATGTTGGCAGGTGGGACTCCATTGGCCCAGCCAAGAATTGAATCTTTGAATTTCTTGCGTTTTTATGGGCGTAGGTTTTCAGAGGCTTCCACGATAGCCGAGGAAAGCACCGCGTCTCAACAAGCACTGAAACCTTCAGCTGGGTCTCAAACCGCTTTTTCTTACATTTCTTCACATGACATCTCAGGGCCTAGATAA 2577 0.4486 MEPIFHFSLLLLFFSAISAAYTFSESINPNFTATFLQFIYNSGAFLSSRNGTFEAAIFNPGYQQSRFYLCVIHVPSRTIIWSANRDAPISNSDTMNLTTKGIAIFDHDRNIKWSTPPLKSPVSALQLTETGNLVLLDSSNVSLWESFQHPTDTIVMGQRLPVGSWLSSAISGSDFSTGDYNLSITSSDAMLRWRGQTYWKLSMILNAFQDSSHMVEYMAINRTALDLFGSNGTVTVFRVVLPMADFRIAKLAVNGQFTVQSFSGTSWAQDFVGPDDGCETPFFCGRLGLCTHGAASSTPSCSCPPNFHAGSSDVPGCVPSSGSYSSPSACNSSVYDSASNSSSVSYLALGGGIQYFGNTYSNTVTYVVSLTICQDLCSRNCSCLGFFYENSSGSCYMLENQLGSIMSSSGGASNSLGYIKVFGASASAIGPPTSEEDRLPVAVLVVIPIAGFIIAMALGFLWLRRYRTSRAKERELDNFKSRSFDDLETFYIPGLPKRFDYEELVEATDNFKTLIGSGGFGAVFKGQLPDKTVVAVKKIVSLGNQGKKDFCTEIAIIGNIHHFNLVKLKGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPALEWKERFDIALGTARGLAYLHGGCEQKIIHCDIKPENILLHDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSVVGSQSPSKDESMSSNSGTSSGTGLVYFPLYALEMHEQGRYLELADPRLEGRVSNEEVQKLVRVALCCVHEEPSLRPNMAAVVGMLAGGTPLAQPRIESLNFLRFYGRRFSEASTIAEESTASQQALKPSAGSQTAFSYISSHDISGPR 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2686 858 SMART serkin_6 509 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2686 858 Pfam PAN domain 358 401 IPR003609 -
Acco05g2686 858 SMART blect_4 37 150 IPR001480 -
Acco05g2686 858 SUPERFAMILY Hairpin loop containing domain-like 360 399 - -
Acco05g2686 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 201 IPR036426 -
Acco05g2686 858 ProSiteProfiles PAN/Apple domain profile. 330 422 IPR003609 -
Acco05g2686 858 FunFam serine/threonine-protein kinase PBS1-like 479 584 - -
Acco05g2686 858 CDD STKc_IRAK 515 795 - -
Acco05g2686 858 Pfam D-mannose binding lectin 78 160 IPR001480 -
Acco05g2686 858 Pfam S-locus glycoprotein domain 232 308 IPR000858 GO:0048544
Acco05g2686 858 Gene3D - 37 149 IPR036426 -
Acco05g2686 858 SMART ntp_6 341 418 IPR003609 -
Acco05g2686 858 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Acco05g2686 858 Gene3D Transferase(Phosphotransferase) domain 1 585 802 - -
Acco05g2686 858 ProSiteProfiles Protein kinase domain profile. 509 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2686 858 PANTHER OS07G0415500 PROTEIN 9 806 - -
Acco05g2686 858 Gene3D Hepatocyte Growth Factor 350 415 - -
Acco05g2686 858 CDD PAN_AP_plant 351 421 - -
Acco05g2686 858 PIRSF SRK 2 847 IPR024171 GO:0004674
Acco05g2686 858 Gene3D Phosphorylase Kinase; domain 1 485 584 - -
Acco05g2686 858 SUPERFAMILY Protein kinase-like (PK-like) 485 795 IPR011009 -
Acco05g2686 858 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Acco05g2686 858 MobiDBLite consensus disorder prediction 830 851 - -
Acco05g2686 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 148 - -
Acco05g2686 858 Pfam Protein kinase domain 512 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2686 858 CDD B_lectin 41 150 IPR001480 -
Acco05g2686 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Acco05g2686 858 FunFam Serine/threonine-protein kinase 585 803 - -
Acco05g2686 858 MobiDBLite consensus disorder prediction 830 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2686 Acco-ChrAcco05 42278667 42281243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2686 449 804 Receptor kinase-like Gene Family AT5G20050 40.426 2.92e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco05g2686 Pkinase 3.5e-48 CL0016