Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2680 ATGACTCCCATTTATTTACTGCTATCTATGTCTATTAAAGGACCAAACTTTATTCGGAAGCATATGGGGTGGCATGATTTTGAGGCAAAAGGAATCAAAACAACAAATAGAAGTTCTAGAGGGCGTTGCCTGCTGGACGGGATTACTGATAAGTCCATAGGACTTCTTTTTCATAGTCAAAATTCGAGCACAAAGCCACTAGCACGATCCCTTTATGAAAACATGCATCATGCCCGGACCCTGGTGGATATCCCTGAAGAGGATTCGAACTATTCTTGTTTGGCTCAGCCAACTTTCATCTTTATTGAAATGAGCAAACCCAGAATCCATAGGAAATCCACCAAGCAAGCCACTGCAAAGAACCAAAAACCGCAGAAATCAGAGAAACAACCCTCTTGGTTAGTGGTAAGAGGCCTATTGACATGTAGAAATGTTCAAACCCAGCCGCAGCAGAAGCAGCCGCAACAAATTCCTGAAGGGAAACAACAACCAAAGAAGAAACAAGAACAGCGAAAGTTGCAGGAGGAAAGAGTCCCAGAAGATCAGAACAGCAAGAAATGCAAGAAGATGAAATGTTCAGGCTCACTTTGTAATAACACAAATATCATGGCAAAGCCTGAAACTGGATGCCCGGATTCGCACAACAAAAAGGCCTCATTGTCTGCATGTAGCAGCAGCAACAATGATTCTTCAAGCAGATCCATGAAAGCTCCTCCACGAGAACCCAACGCAGCCGTCTTGGCATCTTCTTCATTATTAGCATCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCCCTTCAGGAGACTCTCTGGCTGTTATGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTTCGAAGCAGCATTTGTCCATGCCCAGACTGTGGTGAGATCTTCACAAAAGCTGAAAGCTTGGAGCTTCATCAGGCTGTTAAACATGCAGTATCGGAACTGGGTCCTGAAGATACAAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTAAAGAAACAGTCCCCAGTCTGCAAAATAGACCGCATCCTCAAAGTCCAAAACACCCAGAAGACGATATCCAAATTCGAAGAATACAGAGATTCCATTAAAGCTAAAGCAACAAACCTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTTCTCAGGTTTCACGCCACCACTTTCGTGTGCTCTCTGGGCCTAAACGGTTCGTCCAACCTCTGCAACTCAATACCACAGTGCAACGTTTGCAACATAATCAAGAATGGCTTTAAGGTGGCGGCAGAAACGACGAACGGAGAAAACGACGGGAAGGGAATATTGACGACGGCGACGAGTGGGAAGGCACACGACAGAGCGGTGGTTTCCGGGGACGAGAAAAATGATGTCAGGGCGATGCTGGTTTGTCGTGTAATAGCTGGCAGGGTGAAGAAGAACATGGAAGGAAGTATGGAAGAGCATGATTCGATTGGATGTGGTGTCGGGGCGTATTCTAATTTGGACGAGTTGTATGTGTTCAATCCAAGAGCTATATTGCCTTGTTTTGTTGTGATCTACAGAGTGTATTGGTTATTGAAAACTGTGAAGGAATCAGAAGTGGACAAGGCATGCTTGAAGGCAGAGTAG 1662 0.4525 MTPIYLLLSMSIKGPNFIRKHMGWHDFEAKGIKTTNRSSRGRCLLDGITDKSIGLLFHSQNSSTKPLARSLYENMHHARTLVDIPEEDSNYSCLAQPTFIFIEMSKPRIHRKSTKQATAKNQKPQKSEKQPSWLVVRGLLTCRNVQTQPQQKQPQQIPEGKQQPKKKQEQRKLQEERVPEDQNSKKCKKMKCSGSLCNNTNIMAKPETGCPDSHNKKASLSACSSSNNDSSSRSMKAPPREPNAAVLASSSLLASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICPCPDCGEIFTKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVQNTQKTISKFEEYRDSIKAKATNLPKKHPRCIADGNELLRFHATTFVCSLGLNGSSNLCNSIPQCNVCNIIKNGFKVAAETTNGENDGKGILTTATSGKAHDRAVVSGDEKNDVRAMLVCRVIAGRVKKNMEGSMEEHDSIGCGVGAYSNLDELYVFNPRAILPCFVVIYRVYWLLKTVKESEVDKACLKAE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2680 553 ProSiteProfiles Zinc finger C2H2 type domain profile. 299 327 IPR013087 -
Acco05g2680 553 MobiDBLite consensus disorder prediction 106 130 - -
Acco05g2680 553 Gene3D - 323 533 - -
Acco05g2680 553 MobiDBLite consensus disorder prediction 146 161 - -
Acco05g2680 553 SUPERFAMILY ADP-ribosylation 324 532 - -
Acco05g2680 553 MobiDBLite consensus disorder prediction 214 237 - -
Acco05g2680 553 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 189 531 - -
Acco05g2680 553 ProSitePatterns Zinc finger C2H2 type domain signature. 299 322 IPR013087 -
Acco05g2680 553 MobiDBLite consensus disorder prediction 146 185 - -
Acco05g2680 553 MobiDBLite consensus disorder prediction 210 243 - -
Acco05g2680 553 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2680 Acco-ChrAcco05 42246939 42251166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2680 264 533 C2H2 Transcription Factor Family AT1G75710 53.061 8.58e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco05g2680 None None None