Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2678 ATGCGAGAGACAGCAGCGATGGAGGATTTGCAGGCTGCTCTAAAGGGTCGTAATTTAACGGTTTCCACCGTGGAAGATAAGGGTCGTTGTCTCTTAGCCACGAGAGATTTTTACCCTGGAGACGTAATTATAAGCCAAGAGCCTTATGTCTGTGTGCCAAATAATTCTTCAGCCCAAACAAGGTGTGATGGGTGTTTCGCAACAAGTAAACTTAAAAAGTGCTCTGCTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGAAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTCCTCTCAAGGCTGGAAAAGAACAAGAGAACATCTGTCACACCATCCATTCGCCTGATGGTAAAACTTTATATTCGAAGGAAGTTGCAAAGTGAAAAGGTTATCCCTAGCACCGCTACAGACAACTATAACTTGGTGGAGGCATTAGTGGCACACATGTCTGACATAAATGAGGAACAGCTGGTTCTGTATGCACAGATGGCTAATCTTGTAAGCTTAATATTGCAGTGGCCTGAAATCAACATAAAAGAGATCACTGAAAATTTTTCCAAGTTTGCATGCAATGCACATACCATTTGTGACAGTGAACTGAGACCGTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTTTTGGTTTTTGAGGGAAGGTCAGCCGTAGTACGTGCTGTACAACATATACCCAAAGGTTCAGAAGTTCTGATAAGTTATATAGAGACTGCTGGGAGCACTATGACCCGGCAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGCTCCTGCCCCCGCTGTGTTAAAGCGTTAGTTTTTAAGGGCCAATCCGATGATATTCAAGAAAGTGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTGTGGTTTCTTGATTCGTACTAATGATGGAAAAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTGTCTGAAGACAAAGCTTCTAAACTTCATACAACTGGCAATTATCAGGAAGCTGTTGCTGTATACAAAATAATTGAGAAATTCCAATCAAAATTGTGCCATCCCTTTTCAATCATCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGTTGGAACATTGGAGAGAAGCTCTGGTATACTGCAAATTGACCCTACCAGTTTATCAGAGAGTTTATCCAGCAGTTCATCCGTTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGAATGGTATCTGGGGGACACGGAGGGTGCTGTTAAATCGCTGACTAGGGCAGTGGATATACTAAGAATCACTCACGGCACAAATACACCTTTCATGAAGGAACTATTGATGAAGTTGGAAGAAGCCGTTGCAGAAGCCTCTTACCAACAGTCCTCCAAAGACAAGTAG 1479 0.4212 MRETAAMEDLQAALKGRNLTVSTVEDKGRCLLATRDFYPGDVIISQEPYVCVPNNSSAQTRCDGCFATSKLKKCSACQVVWYCGSTCQREEWKLHRLECEVLSRLEKNKRTSVTPSIRLMVKLYIRRKLQSEKVIPSTATDNYNLVEALVAHMSDINEEQLVLYAQMANLVSLILQWPEINIKEITENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCSCPRCVKALVFKGQSDDIQESAILEGYRCKNEKCCGFLIRTNDGKGFQCQECGLVRDMEEIKLIATEVKSLSEDKASKLHTTGNYQEAVAVYKIIEKFQSKLCHPFSIILMQTREKLLKLLMELEHWREALVYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEGAVKSLTRAVDILRITHGTNTPFMKELLMKLEEAVAEASYQQSSKDK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2678 492 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Acco05g2678 492 Gene3D Tetratricopeptide repeat domain 412 491 IPR011990 GO:0005515
Acco05g2678 492 Gene3D - 61 108 - -
Acco05g2678 492 Gene3D - 112 196 - -
Acco05g2678 492 SMART set_7 17 260 IPR001214 GO:0005515
Acco05g2678 492 SUPERFAMILY SET domain 18 253 IPR046341 -
Acco05g2678 492 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Acco05g2678 492 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 478 - -
Acco05g2678 492 Pfam SET domain 28 253 IPR001214 GO:0005515
Acco05g2678 492 Pfam MYND finger 62 99 IPR002893 -
Acco05g2678 492 SUPERFAMILY TPR-like 350 457 IPR011990 GO:0005515
Acco05g2678 492 Gene3D SET domain 30 280 IPR046341 -
Acco05g2678 492 ProSiteProfiles SET domain profile. 17 254 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco05g2678 SET 1.5e-14 No_clan