Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2666 ATGCATCACCTACCTCGTATTTTTGGTTACAGAAAGCAAAGCAAGGGCATGGACCCGAATAAAGGCCGAAGAAAATTCCGGCTCGATCGCCGCAATGCCGTCAAGGACGTTGAGTATGATGCTGGGTCGTCTTCGTCGTCTCTAGACAACTCGTGTGGATCCCTCTACACTCGATCAACGGAGTTCAGTGATCGAATTAGCTTCCGAATTTCCGGAGCTGAGGGCGAGGTTGACCGCATGTGCAGTGATTTGGGGTTTTCCGGACCTGAAGACTTCTCCATTCCGGCGGCGGCGTGGGAGGCTATGAAAAGTAGATCGTCTCCGGATATTACACCAAGTTCGAAGATGAACGAGTTAGAAGGTCAGGAGAACGAGAAATTACGTGAAGAGAGTCCAGGAGCGGGTGACTTGGGTAACAAATTCGAAGAAAGGGTTACCTTTAGATATTTAGCTGAGTCAACTCAAGATGAGCCTGCTGAGACTAGTGGCTGCTGCATTGCTGGCGATCGTGTTTGCGGAACCAGTGTCGGAGTAGGTATTAAAGGAATCCGTCCACCGATGCTAAAGCCGCCGCCTGGAGTTAGGCATCCGGTTATTGATAACACTTGCTCTACTTGGGACATTTTAAGGGATTTAACTCCTGCAAGACAAGCTTTAGGAAATTACGGGGAGTTGAACTCGTCCGATGATAACCAAGTAATACAAAGGGAAGCAGAGCAAGGAGAAGTAAATGAAGAGGATAAACAAGAACCGGTAGTTGAAGGCAAGGTAAGTCCGAGTGGACAAGAGGATGTTAATGCAACAAGGATTGCGGAGATCGTTGCTCAGCTTTCGGCATCGTGTTCGTTTACTACGTCAAACGAAGATGATTATTCTAGCACTTTCACGGATCCTCCATCGAATAATATATCTCCCAACGTAAGATTCAGGCGCAGAATTACGAACTGGGAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTCTATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCACTACTTGATCAAGACGAACAGGGAAGGCAAAGTGTCTATTGCCTGGAGCAGGAAATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGGATCAATCAAAACTGTATATTTTTCTGGAGCTTGTGACAAAAGGTTCCCTTGCAAATCTTTATTGGCGGTACAATCTTCGAGACTCACAAGTATCTGCCTACACTAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTAGATGCAAATGGATCTGTCAAGCTTTCAGATTTTGGATTGGCAAAGGCTACCAAACTGAATGATATTAAGTCTTGCAGGGGGACAGCATTCTGGATGGCACCTGAGGTTGTGAAAGGAAAGAATCAAGGTTATGGACTTTCGGCTGATATATGGAGTCTGGGGTGCACTGTGCTTGAGATGTTAACAGGCCAAATTCCATACTCTCATTTGGAATGTATGCAGGCTTTATATAGAATTGGAAAGGGTGAGCGCCCTCTTGTTCCTGACTCTCTTTCAAGAGATGCGCAAGATTTTATCATGCAGTGTCTTCAAAAGGGGTTGAATTTAACCGACCATCTTAAAGTACGAAACACTGGGCTATGTTCATTGAATGTGGAGAATTATGGTATCCAATTTTCAATTTGCTGGAGTTGGTCTCTGATCCACTATCGCTGCAAATCTGCAATTGCTGCTCGTGCTGTGGAATTTAGAGTTTTCCCTGAAATGATCCGGAGCTCCCCAAAACCAACTAAACAAATTGGTTCTGATGAGCCTTTTCACTGA 1884 0.4432 MHHLPRIFGYRKQSKGMDPNKGRRKFRLDRRNAVKDVEYDAGSSSSSLDNSCGSLYTRSTEFSDRISFRISGAEGEVDRMCSDLGFSGPEDFSIPAAAWEAMKSRSSPDITPSSKMNELEGQENEKLREESPGAGDLGNKFEERVTFRYLAESTQDEPAETSGCCIAGDRVCGTSVGVGIKGIRPPMLKPPPGVRHPVIDNTCSTWDILRDLTPARQALGNYGELNSSDDNQVIQREAEQGEVNEEDKQEPVVEGKVSPSGQEDVNATRIAEIVAQLSASCSFTTSNEDDYSSTFTDPPSNNISPNVRFRRRITNWEKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQDEQGRQSVYCLEQEIALLSQFEHENIVQYYGTEMDQSKLYIFLELVTKGSLANLYWRYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLSDFGLAKATKLNDIKSCRGTAFWMAPEVVKGKNQGYGLSADIWSLGCTVLEMLTGQIPYSHLECMQALYRIGKGERPLVPDSLSRDAQDFIMQCLQKGLNLTDHLKVRNTGLCSLNVENYGIQFSICWSWSLIHYRCKSAIAARAVEFRVFPEMIRSSPKPTKQIGSDEPFH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2666 627 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Acco05g2666 627 Pfam Protein kinase domain 317 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2666 627 SMART serkin_6 316 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2666 627 MobiDBLite consensus disorder prediction 103 138 - -
Acco05g2666 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Acco05g2666 627 MobiDBLite consensus disorder prediction 239 253 - -
Acco05g2666 627 MobiDBLite consensus disorder prediction 239 261 - -
Acco05g2666 627 SUPERFAMILY Protein kinase-like (PK-like) 290 553 IPR011009 -
Acco05g2666 627 FunFam Mitogen-activated protein kinase 1, putative, expressed 314 560 - -
Acco05g2666 627 MobiDBLite consensus disorder prediction 1 29 - -
Acco05g2666 627 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 139 552 - -
Acco05g2666 627 Gene3D Transferase(Phosphotransferase) domain 1 313 560 - -
Acco05g2666 627 ProSiteProfiles Protein kinase domain profile. 316 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2666 627 MobiDBLite consensus disorder prediction 119 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2666 Acco-ChrAcco05 42117067 42130930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2666 9 551 MAP Kinase Kinase Kinase AT4G08500 47.099 7.10e-152 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco05g2666 Pkinase 1.5e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2666 05 42117067 42130930 Acco10g2366 10 35332478 35338629 CCT
Acco05g2666 05 42117067 42130930 Acco05g2666 05 42117067 42130930 ECH