Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco05g2629 | ATGGGTTTCTACAGTAGCAGAGCACTTCATTCAGATCCTTTCAGGGGTGAGTTGATGGAAGTACTCGAACCTTTTATGAAAAGTCCTTCCACAACTCCCTCTTCCCCTTGCTCAAATTTCTCTGTCCCTTCTACGTCCTACTCTTCTTCTTCACCCAACTCCTTCCTCTCTGGTCCATCACCCCCTTCACAGCCCAGCTTTCTGGCAGATGGTTGCTCCACGTCGATGACCCCTATATTTAACGATGGGTTATCGAACAGCCTCAACCCAATCGGCTTCGGACAACCAAGCTCTGTCCTCGGGCTCAACCACCTAACCCCATATCAGATTAACCAGATCCAAGCCCAGATCCAGCTCCAGAACCATCAAAACACGTGCTGGCAGCAAAATAGGGCCGCCTCCACCCTTGGCTTCTTGAGTCCCAAACCTATTCCGATGAAGCATGCAGGTGTGCCTCCTAAACCCACGAAGCTCTATCGAGGGGTCAGGCAGCGTCACTGGGGGAAGTGGGTTGCCGAGATCAGGCTACCTAAGAACCGCACGCGACTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCTGCCCTTGCCTATGACAAGGCCGCTTACAAGCTCAGGGGTGACTTTGCCAGGCTCAATTTCCCCAACCTTCGACATCAAGGTTCTTGTGTCGGCGGCGAATTCGGGGAGTACAAGCCACTCCACTCCTCTGTTGACGCCAAGCTTGAAGCAATCTGCGAAAGCTTGGCCGATTTGCAGAAACAGGGTAAATCAGGGAAGTCGACGGGCTCATCCAAAAGGTCAGGCGGGCGGTCGAAGGTTGGTTCGAAAGATGCTCAGCCAGTGGCCAACGTAGCCGATGTGAAGGTGGAAAGCGCTCCGTCACCGGTGATGACGGAGAGCGAGGGATCCGGGGGTTCTTCTCCCCTGTCGGATCTGACTTTTGCTGACGCGAGCGAGCCACAGTGGGACGGGGCTTTGGATAATCTGAATCTGCAGAAGTTTCCTTCTTATGAGATTGATTGGGCATCTCTGTGA | 1038 | 0.5395 | MGFYSSRALHSDPFRGELMEVLEPFMKSPSTTPSSPCSNFSVPSTSYSSSSPNSFLSGPSPPSQPSFLADGCSTSMTPIFNDGLSNSLNPIGFGQPSSVLGLNHLTPYQINQIQAQIQLQNHQNTCWQQNRAASTLGFLSPKPIPMKHAGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSCVGGEFGEYKPLHSSVDAKLEAICESLADLQKQGKSGKSTGSSKRSGGRSKVGSKDAQPVANVADVKVESAPSPVMTESEGSGGSSPLSDLTFADASEPQWDGALDNLNLQKFPSYEIDWASL | 345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco05g2629 | 345 | Pfam | AP2 domain | 159 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | MobiDBLite | consensus disorder prediction | 254 | 270 | - | - | |
Acco05g2629 | 345 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 7 | 345 | - | - | |
Acco05g2629 | 345 | MobiDBLite | consensus disorder prediction | 253 | 319 | - | - | |
Acco05g2629 | 345 | FunFam | Ethylene-responsive transcription factor 2 | 157 | 216 | - | - | |
Acco05g2629 | 345 | PRINTS | Ethylene responsive element binding protein signature | 159 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | PRINTS | Ethylene responsive element binding protein signature | 181 | 197 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | CDD | AP2 | 157 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | SMART | rav1_2 | 158 | 221 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | SUPERFAMILY | DNA-binding domain | 158 | 216 | IPR016177 | GO:0003677 | |
Acco05g2629 | 345 | ProSiteProfiles | AP2/ERF domain profile. | 158 | 215 | IPR001471 | GO:0003700|GO:0006355 | |
Acco05g2629 | 345 | MobiDBLite | consensus disorder prediction | 297 | 315 | - | - | |
Acco05g2629 | 345 | Gene3D | AP2/ERF domain | 158 | 216 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco05g2629 | Acco-ChrAcco05 | 41832616 | 41833653 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco05g2629 | 16 | 345 | AP2-EREBP Transcription Factor Family | AT1G78080 | 54.519 | 3.44e-96 | 287 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Acco05g2629 | AP2 | 7.8e-15 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco05g2629 | 05 | 41832616 | 41833653 | Acco10g2328 | 10 | 35030555 | 35031634 | CCT |