Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2606 ATGCCTGATTCACTCTCAGTTAGCGTTGGTTCCCCACCACCTAAGTTTGGAGTATCTTTTGAGCAAACTATGAGAGAAGCAAAGTACTTTGATGACATCCAAACAAGTATCCAAGAGACCAACGAAGCCTCTCCAAATAGTTTCCAAAACGGTCTAGCTGAGCTCGTGGGTACTTATGTTATTATATTTGTGGGATGTGGGGCTGGCCTGGTCAGTAACGTGGACCAGCTCAACAGAGTGGGAGTAGCAATGGGCGCAGGTCTTTCTTTGACGGTGGCTATATATTCAGTTGGTCATATCTCCGGTGGCCACTTCAATCCTGCAGTATCTATAGCCTCCGCTGTTGCTCGCAAACTTCCATTCAAACTTGTGCCTATTTACCTTCTGTGCCAGCTGATGGGTGCTATTCTGGCCAGCCTTAACCTCAAGGTGCTGTATGAAGGGCAGGCAGACATTAGGGTGGTGGTGACCCAGTACTCGAGTTTAACGAGTCACCTTGAGGCTATCTTATGGGAGTTCATAGCCACTTTCATATTAATGCTCACCATTTGTGGTGTTGCCATTGATCACAGAGGGAGCAAAGACCTCGCTGGACTTGCACTAGGCACAGCAGTTCTAATCAACGTCATCTCTGTTGGGCCCATTACTGGAGCTTCCATGAATCCTGCGAGGAGTTTGGGGCCAGCTATTGTCTCTGGCGTCTTTAAAAATATTTGGGTCTATATCATTAGCCCTATTATGGGAGCCAGCACTGCCACTGTGGTTTACAGTTTACTTAAGTACCCAAACCGGATAAAGGCCTGA 804 0.4726 MPDSLSVSVGSPPPKFGVSFEQTMREAKYFDDIQTSIQETNEASPNSFQNGLAELVGTYVIIFVGCGAGLVSNVDQLNRVGVAMGAGLSLTVAIYSVGHISGGHFNPAVSIASAVARKLPFKLVPIYLLCQLMGAILASLNLKVLYEGQADIRVVVTQYSSLTSHLEAILWEFIATFILMLTICGVAIDHRGSKDLAGLALGTAVLINVISVGPITGASMNPARSLGPAIVSGVFKNIWVYIISPIMGASTATVVYSLLKYPNRIKA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2606 267 CDD MIP 49 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PANTHER AQUAPORIN NIP2-1 34 263 IPR034294 -
Acco05g2606 267 SUPERFAMILY Aquaporin-like 46 263 IPR023271 -
Acco05g2606 267 Gene3D Glycerol uptake facilitator protein. 18 266 IPR023271 -
Acco05g2606 267 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Acco05g2606 267 PRINTS Major intrinsic protein family signature 202 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 PRINTS Major intrinsic protein family signature 239 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 NCBIfam MIP family channel protein 53 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g2606 267 Pfam Major intrinsic protein 45 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2606 Acco-ChrAcco05 41662327 41663537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2606 21 264 Major Intrinsic Protein MIP AT5G37810 41.833 1.01e-59 189