Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2601 ATGGCTCGTCATCACCGGTCCCAGTTCGGCAACACCACATTCACCAAAGTGTTCGTGGGAGGACTAGCTTGGGAGACGCCCGCTGATGAAATGCGTAGATATTTCGAGCAGTTCGGACGCATTCTTGAAGCTGTTATCATCAACGATAAGCACACTGGAAAGTCTAAAGGCTATGGATTCGTAACTTTCCGTGATCCAGACTCAGCAAGAAAAGCCTGTGCTGATCCCAAACCTATGATATATGGAAGGAGAGCAAATTGCAATATTGCTTCTCTAGGACGCCCTCCATCTCCTCAAGGAACGAATATATCGGTACAAGATGGTGGTAAACAAGTCACATCACGAGAAAAGCCGGCAGCCTATTGCAATGGAGTTTCGGCAGCGGCAGCCCCGCCTTCTCTGATGTACTCAGCAGCGTACAGCTATCCGACCTACACTACTGATTACGGGTTCCACCAAGCACAATACTATCAACAATTCTATGGACAATCATATTCATATTACTATGGTTATTGTGTTCAAACACCAAGGCCAAGGGCTGCATTCCCATCTACAGATTCTCGAACCCAGCAACGAAGCTCCTTGGAGACAGCAGCTGAAGTAGGTACAACTTCAGAAAGTGCCAATAACCAAGGGAAGAACTGA 645 0.4713 MARHHRSQFGNTTFTKVFVGGLAWETPADEMRRYFEQFGRILEAVIINDKHTGKSKGYGFVTFRDPDSARKACADPKPMIYGRRANCNIASLGRPPSPQGTNISVQDGGKQVTSREKPAAYCNGVSAAAAPPSLMYSAAYSYPTYTTDYGFHQAQYYQQFYGQSYSYYYGYCVQTPRPRAAFPSTDSRTQQRSSLETAAEVGTTSESANNQGKN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2601 214 PANTHER BOULE-RELATED 6 184 - -
Acco05g2601 214 Gene3D - 2 108 IPR012677 -
Acco05g2601 214 SUPERFAMILY RNA-binding domain, RBD 14 110 IPR035979 GO:0003676
Acco05g2601 214 SMART rrm1_1 16 88 IPR000504 GO:0003723
Acco05g2601 214 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 92 IPR000504 GO:0003723
Acco05g2601 214 MobiDBLite consensus disorder prediction 180 214 - -
Acco05g2601 214 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2601 Acco-ChrAcco05 41591598 41594163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2601 17 176 C2H2 Transcription Factor Family AT2G19380 30.625 9.97e-16 73.6