Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2574 ATGGCTTTGGAACCGCCCGTTGATCAAGGAAAATCCATGAGCAAATTATTGTCATTTAGCCAATCGTTGTCTATTAGACGAGGCACATTTCCAAATCTCTCCTTGATGAGCTGCAATTTTGCCAAAATAAATGACCAGTTTGGAATTACAAGATCACCTTCAAATTATCGTTATATTCATGCCACAGCATTTCTTTCTTCTATTGAACGAGACTACTATCAAATTCTTGGTGTTTCTGAAAATGCCAGTCAGGATGATATCAAGAAGGCATTTCACAGACTTGCTAAGAAATACCATCCTGATGCAAATAAGAACAATCCATCTGCCAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACTCTGCGAGATTCTAAAAAGAGGGCACAGTTTGACAGGATGCGAACTTCTGATTCTGAGAACATAGAATATGAACGGGATTCTGAGAACATAGAATATGATCGGAATGCTGAAGAACGGTTTAGAAATGCTTATCGGGCTCACTTTTCTGATTCATTTCATAAAGTCTTCTCTGAGATGTTTGAAGAATCCACCACTCATTCTACATCAAACATTGAGGTTGAGATATCACTTTCTTTCTTAGAAGCTGTTAAGGGGTGCACCAAACATGTGTCTTTTGATGCAGCTGTTCCCTGTGATTTTTGTGATGGGAGAGGCTATTCGCACAATGCAAAGGCAATTGTTTGTCCAACATGCAGGGGCGTAGGCAGAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGACCATTGTAAATCTTGTGGAGGGTCTGGGGTGGTAGAAGGCATCAAAGATGTTAAAGTCACAGTACCAGCAGGTGTGGATTCAGGAGATACAATTCATGTGCCTGAAGCTGGACATGCTACTGGACGTGGAGGCCGACCAGGAAGTCTATATATTAAAATAAAGGTGGCTAAGGATCCTGTTTTTGCCAGAGACGGTGCAGATATATATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGCGGTGAAGTTGAGGTGCCTACTTTATCAGGGAAGACGCTTGTGAAAATACCTAAGGGTGTTCAACCAGGACAGCTTCTGATATTAAGAGGCAAAGGACTACCAAAGCATGGTTTTCTTGTAGACCATGGAGATCAGTTTGTGCGCTTCCGTGTTAACTTCCCCACTGTAATTAATGAACGACAACGGGCCCTTTTAGAAGAACTTGCAAAGGAAGAAATAAATGAGGGATACAATTCACAGATTGAAGGAAACTGGTCGCAGCAAATTCTCAGATACATGACGAGCCCAAAGTTTGGAAAAAAAGTGATTGCTGCTTTCTGCCTGGCCACAGACTGTGTTATTGAAAGGGCTAGGTAG 1404 0.416 MALEPPVDQGKSMSKLLSFSQSLSIRRGTFPNLSLMSCNFAKINDQFGITRSPSNYRYIHATAFLSSIERDYYQILGVSENASQDDIKKAFHRLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQFDRMRTSDSENIEYERDSENIEYDRNAEERFRNAYRAHFSDSFHKVFSEMFEESTTHSTSNIEVEISLSFLEAVKGCTKHVSFDAAVPCDFCDGRGYSHNAKAIVCPTCRGVGRVTIPPFTSTCITCRGSGRVIKDHCKSCGGSGVVEGIKDVKVTVPAGVDSGDTIHVPEAGHATGRGGRPGSLYIKIKVAKDPVFARDGADIYVESNISFTQAILGGEVEVPTLSGKTLVKIPKGVQPGQLLILRGKGLPKHGFLVDHGDQFVRFRVNFPTVINERQRALLEELAKEEINEGYNSQIEGNWSQQILRYMTSPKFGKKVIAAFCLATDCVIERAR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2574 467 Gene3D - 250 282 - -
Acco05g2574 467 Gene3D - 215 249 - -
Acco05g2574 467 SUPERFAMILY HSP40/DnaJ peptide-binding domain 327 414 IPR008971 GO:0006457|GO:0051082
Acco05g2574 467 PRINTS DnaJ domain signature 73 91 IPR001623 -
Acco05g2574 467 PRINTS DnaJ domain signature 91 106 IPR001623 -
Acco05g2574 467 PRINTS DnaJ domain signature 108 128 IPR001623 -
Acco05g2574 467 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Acco05g2574 467 Pfam DnaJ central domain 220 276 IPR001305 GO:0031072|GO:0051082
Acco05g2574 467 FunFam Chaperone protein dnaJ 1, mitochondrial 323 430 - -
Acco05g2574 467 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 323 IPR008971 GO:0006457|GO:0051082
Acco05g2574 467 Gene3D - 323 431 - -
Acco05g2574 467 Gene3D DnaJ domain 68 190 IPR036869 -
Acco05g2574 467 Hamap Chaperone protein DnaJ [dnaJ]. 68 433 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Acco05g2574 467 Gene3D - 191 321 - -
Acco05g2574 467 SMART dnaj_3 70 128 IPR001623 -
Acco05g2574 467 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Acco05g2574 467 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 421 - -
Acco05g2574 467 CDD DnaJ_zf 220 276 IPR001305 GO:0031072|GO:0051082
Acco05g2574 467 Pfam DnaJ domain 71 133 IPR001623 -
Acco05g2574 467 SUPERFAMILY Chaperone J-domain 70 139 IPR036869 -
Acco05g2574 467 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 278 IPR036410 -
Acco05g2574 467 CDD DnaJ_C 191 404 - -
Acco05g2574 467 ProSiteProfiles Zinc finger CR-type profile. 207 281 IPR001305 GO:0031072|GO:0051082
Acco05g2574 467 CDD DnaJ 71 125 IPR001623 -
Acco05g2574 467 Pfam DnaJ C terminal domain 193 403 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2574 Acco-ChrAcco05 41396989 41404026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2574 67 137 C2H2 Transcription Factor Family AT1G74250 38.158 5.24e-08 53.5