Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2559 ATGGGCTTCTTCTCCTGCAATGCTGAATCTGCAGTCGCCACCTGTGATTCCCACTACTGGGACCTCAAGAAGAGGAGTTCCAACAGAACCAGGAGAAGAACTCACAAGCATAAGCTCGTTGAGATCAGGGAGTTTCAGTTCTCGGAGCTACTCGCAGCCACCGGCGGTTTCTCCGCTGACAGCTTCCTGGGCAAAGGCAGCCATGGCAGTGTCTACAAAGCTGCCCTCGACGACGGCAAGCTTATCGCCGCCGTCAAAAGAACAAAGTTCTCCAAGCCTCAGCTCACTAGCCTCCGCAACCACTCCGCAAACTGTACCGGCTGTGCTAATTGTACAAGCCCTGCCGAGAACGAGATCGAGATTCTCTCTCGGGTTCGAAATCCTCGCCATTTCGTCAACCTCATTGGATTTTGCAATGACTCCAGCGGGAATCAGTTGATTGTCGTTGAGTATATGCCCAACGGTTCTCTCTACGATGCCCTGCACTCCAACTCCAGACCGCCGGGTTGGAGCCGGCGGGTTCGGTTAGCTCTGCAGGTGGCAAAAGCTGTGCTGGCGCTTCACTCCTCGAATCCGCCCGTGATTCATCGAGACATAAAGTCGTCCAACGTTCTGATCGACGAGAAGGGAAAGGCGAGGCTGGGCGATTTCGGTCTGGCATTGAGGGGACACGTGGAGGACGTTCGGGTGAAATGCACGCCGCCGGCGGGGACGATGGGATACCTGGACCCGGGCTACCTAGCGCCGGGGGATCTGAGCACGAAGAGCGACGTGTTCAGCTTCGGGATCTTGCTGTTGGAGATCATCAGTGGAAGGAACGCGATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCGGTGCCGTTGATAAAGCGCGAGGAGTTCCTCGGAATCTGTGACCGGCGAATTGGGAGGCCGTCTGACACGGCGATTATAAGGCATCTGGGGACGTTGGCGGCGAAGTGCGTGAGGTCGACGGCAGAAAAGAGGCCGTCAATGTCGGAGGCAGTGGAGTGGCTGGAACAGGTGAGGAAGAGGATGCAGGTGACGCCCATATGGAGGGGTCTGAGGCGGCGGGAGGAGAATGAAGCAGAATTGGGCGATAGGAGAGAGGAAGTAGTGGGAGGAATAGTGAGAGGGGGAAGCAGAAGGAACGGGAAAGTGTCGAGCGTGGGTGGTGGGGAGCAAGAGAATGAGATGAGTGAAGCTTGCAATAATGGAGTGAGGAGGTCGAGATCAATACCCAACGGGGATGTGGGTGGCATTATTGTGAGGAGCCTCAACAGATCAAGATCCATGTCCATGGAGGGTTTTAATTTGCAAACTTCACTTCGCCTACAGAATTACACGAACAACCCATTCGATCAAAACCAAGACTAA 1386 0.5527 MGFFSCNAESAVATCDSHYWDLKKRSSNRTRRRTHKHKLVEIREFQFSELLAATGGFSADSFLGKGSHGSVYKAALDDGKLIAAVKRTKFSKPQLTSLRNHSANCTGCANCTSPAENEIEILSRVRNPRHFVNLIGFCNDSSGNQLIVVEYMPNGSLYDALHSNSRPPGWSRRVRLALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPGYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKREEFLGICDRRIGRPSDTAIIRHLGTLAAKCVRSTAEKRPSMSEAVEWLEQVRKRMQVTPIWRGLRRREENEAELGDRREEVVGGIVRGGSRRNGKVSSVGGGEQENEMSEACNNGVRRSRSIPNGDVGGIIVRSLNRSRSMSMEGFNLQTSLRLQNYTNNPFDQNQD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2559 461 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Acco05g2559 461 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2559 461 Pfam Protein kinase domain 60 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2559 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Acco05g2559 461 MobiDBLite consensus disorder prediction 382 401 - -
Acco05g2559 461 Gene3D Transferase(Phosphotransferase) domain 1 152 356 - -
Acco05g2559 461 SUPERFAMILY Protein kinase-like (PK-like) 41 354 IPR011009 -
Acco05g2559 461 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2559 461 PANTHER OS01G0253100 PROTEIN 22 349 - -
Acco05g2559 461 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Acco05g2559 461 FunFam Serine/threonine-protein kinase-like protein 152 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2559 Acco-ChrAcco05 41321158 41322543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2559 43 401 Receptor kinase-like Gene Family AT3G59420 37.662 5.48e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco05g2559 Pkinase 6e-36 CL0016