Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2550 ATGGCACCCAGTTTCGATTGCGTTTCAAGTCTTCTTTGTACAGAAGACAATATCACATTCGATGATAACGATTACGAGAGTACGATGGGGATGCCTGAGAATTCGTGGCATCAAACATATCATCGGGTCCACAGTCCGGGCCTTTTCTTTGACGATGTAACTGGGTTGCCATTGCAGAGTGATGAGTGTTTGGCGATAATGGTGGAAAAAGAATGCCAGCACATGCCTGCTGGCGATTACCTGAATAAACTACGGACTGGTGTTTTGGACTCTGGGTCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCTTGCACATTTCCATTTTGGACCTCTCTCTGCATATTTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTGGCTGTGGCATGCTTATCTCTGGCAGCCAAACTAGAGGAGAATAAAGTTCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCCAGAACAATCCAGAGAATGGAGCTTCTCATACTAAGCACACTTAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTCATAGAACATTTCATAAGCAAGATCGATGAAGATCAAACTCCACTAAGAACTTCTACAACGAAATCTATCCAACTTATATTGAATACTGTGAGAGGGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTGTTGTGGGGGGAACCCAAACAGCTAACGCAGAGAAAGCTATCTCTGTTCTTGCTCAACACGTAGATAAGGAGAGAGTCTTGAAGTGTTTTAAAGTGGTGCAAGAGTTGTCATCAAACAGCAGCACCAGCAGTTCTTCTGGTGCTGCTGTTCCTCGAACCCCAATTGGAGTGCTGGATGCAGCATGCTTGAGCTATAAAAGTGATGAAGCAGACGGTTCATATTCAAGTTCTTCGCATACGAATAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCAGCGGAACTGATCTATAA 1050 0.4295 MAPSFDCVSSLLCTEDNITFDDNDYESTMGMPENSWHQTYHRVHSPGLFFDDVTGLPLQSDECLAIMVEKECQHMPAGDYLNKLRTGVLDSGSRKEAIDWIEKVLAHFHFGPLSAYLSINYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEENKVPLCVDLQVAESKFIFEARTIQRMELLILSTLKWRMQAISPFSFIEHFISKIDEDQTPLRTSTTKSIQLILNTVRGIDSLEFKPSEIAAAVAIFVVGGTQTANAEKAISVLAQHVDKERVLKCFKVVQELSSNSSTSSSSGAAVPRTPIGVLDAACLSYKSDEADGSYSSSSHTNSPDAKRRKLNKTSGTDL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2550 349 Gene3D - 77 194 - -
Acco05g2550 349 SMART cyclin_7 99 187 IPR013763 -
Acco05g2550 349 SUPERFAMILY Cyclin-like 52 193 IPR036915 -
Acco05g2550 349 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Acco05g2550 349 Gene3D - 65 282 - -
Acco05g2550 349 SMART Cyclin_C_2 196 333 IPR004367 -
Acco05g2550 349 MobiDBLite consensus disorder prediction 319 349 - -
Acco05g2550 349 FunFam D6-type cyclin 190 282 - -
Acco05g2550 349 FunFam D2/4-type cyclin 77 189 - -
Acco05g2550 349 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Acco05g2550 349 PANTHER CYCLINS 61 292 IPR039361 -
Acco05g2550 349 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Acco05g2550 349 MobiDBLite consensus disorder prediction 333 349 - -
Acco05g2550 349 CDD CYCLIN_AtCycD-like_rpt2 196 282 - -
Acco05g2550 349 CDD CYCLIN_AtCycD-like_rpt1 94 191 - -
Acco05g2550 349 SUPERFAMILY Cyclin-like 178 253 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2550 Acco-ChrAcco05 41252319 41254165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2550 67 320 Core Cell Cycle Gene Families AT2G22490 47.170 8.06e-77 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2550 05 41252319 41254165 Acco05g2550 05 41252319 41254165 ECH