Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2539 ATGCGCTATAAAATCTCTTCTCTCTTCTACACAGTTCTTCTTAGCTTCCATCCTCATCTCTCTCACCCACCCCCTTTTTCTATTACTATCATTATTCAGATTCATTTATCTCTATCCAAATCTCCCCATTCCCAATCATTCCTCTTGGGATTGCAGACAAGAGAAAGAGAAATTTCAGAAGCCATGAAAGGTGAATATGTGGAGCAACAGGCCAAAGCCTCCGATCCTCCAAATATGTTCGCCAAGCTTCACCACCATCCCTTCCCTCACCACCCCTTTCACCTCTCTCGTGGTTCCCAAACCTCCGAGGACGACGACACTCGCAGCGCCTCTGCCACCCCCAACCACCCTCCAAAGCCTTCCTCCGCTGATGGCTCCAGCATTGAGGTCGTCAGGCGCCCCAGAGGCCGCCCTCCCGGCTCCAAGAACAGGCCTAAGCCTCCTGTTATCATAACTCGCGACCCTGAGCCCACCATGAGTTCCTTCATCCTCGAAGTCCCCGGAGGTATGGACGTCGTTGAAGCGATTGCTCGCTTTTGTCGCCGCAAGAACACCGGTCTCTGTGTTTTAACTGGATCGGGAACGGTCGCTAACGTCACCCTTCGTCAGCCCTCTACTACCCCCGGGGCCACCGTTACTTTTCACGGCCGTTTCGATATCTTGTCCATATCCGCCACCTTTCTCGCCAGCCAGCCGACTGACCCTGCGCCGGCGTTTCCCAACAGCTTTACGATATCGCTGGCGGGTCCGCAGGGTCAGATAGTTGGAGGGCTAGTCGCCGGCAGTTTGTTGGCGGCGGGAACTGTCTTCGTAGTTGCTGCTTCCTTCAACAACCCATCCTACCACAGGCTGCCTGCCGAAGAGGACGTCAGAAACTCCGTCTCTGGTGGCGGCGGAGATGGTCAGTCCCCGCCAGTCTCCGGAGGCGGTGTGGAGACTGGTCACGCGCCTGGTGATTCGTGTGGGATGTCTATGTACAGTTGTCAACTACCCTCGGATGTGATATGGGCTCCAACCGCAAGACCACCGTCACCATACTGA 1041 0.5524 MRYKISSLFYTVLLSFHPHLSHPPPFSITIIIQIHLSLSKSPHSQSFLLGLQTREREISEAMKGEYVEQQAKASDPPNMFAKLHHHPFPHHPFHLSRGSQTSEDDDTRSASATPNHPPKPSSADGSSIEVVRRPRGRPPGSKNRPKPPVIITRDPEPTMSSFILEVPGGMDVVEAIARFCRRKNTGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLASQPTDPAPAFPNSFTISLAGPQGQIVGGLVAGSLLAAGTVFVVAASFNNPSYHRLPAEEDVRNSVSGGGGDGQSPPVSGGGVETGHAPGDSCGMSMYSCQLPSDVIWAPTARPPSPY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2539 346 MobiDBLite consensus disorder prediction 290 316 - -
Acco05g2539 346 ProSiteProfiles PPC domain profile profile. 156 297 IPR005175 -
Acco05g2539 346 MobiDBLite consensus disorder prediction 67 156 - -
Acco05g2539 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 288 - -
Acco05g2539 346 FunFam AT-hook motif nuclear-localized protein 160 295 - -
Acco05g2539 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 278 IPR005175 -
Acco05g2539 346 Gene3D - 159 294 - -
Acco05g2539 346 CDD DUF296 162 276 IPR005175 -
Acco05g2539 346 MobiDBLite consensus disorder prediction 105 122 - -
Acco05g2539 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 102 323 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2539 Acco-ChrAcco05 41148820 41149860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2539 62 346 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 59.450 1.03e-106 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2539 05 41148820 41149860 Acco05g2539 05 41148820 41149860 ECH