Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2535 ATGCTTCCCTTCAGGAGTTTCTATGGGTTTGAGAGCTGGTTAGATCAGACTGCGTGTTCTGAGGAACCCAGCTCCTCCATCAAGTCCATGGAATCGGATGAAGCGAAGAAGCCCATTCTGAAATCCATATCAAAGTCTGAGAGGAAATCAATGGAAGCCTGCAAGAGCCATAGGGAAGCAGAGAGGAGACGCAGGCAGCGAATCAACACCCACCTCTCCACTCTACGTTCTCTAATCCCTAACGCCGTAAAGTCGGATAAGGCCTCGTTACTGGGGGAGGTGGTCCGACACGTCAAAGACCTGAGGAAACAGGCCGATGACGTGGCGCGCCATCGCGAGGGAGACTTGTCGGGCAGCACTATCAGCGGAGAATTCGGGTCGGATCCAAGAGACTCGGAGCAGTGGGCATTCCCGGGAGAATCGGACGAGGCAACGGTGAGTTACTGCGACGGAGGAGGGAAGAGGAAACTCATGAAAGCCACGCTCTGCTGCGAGGACCGGCCCAACCTGAACCGAGATCTAGAGGAGGCGATCCGGTCTGTTCGGGCTAAGGCGGTGCGGGCCGAGATGGTGACCATTGGTGGGCGGACCAAGAGCGTGGTGATTGTCCAGTGGACTGGTGGAGAGGAGGAGGAGGAAGATGAGGTTGGGGCACTGGAACGGGCTTTGACGGCTGTTGTAGAGAATCGGGCCTTCGTTGGGCCTAGACTGGGCCGAATGTCGTTGGGACACAAACGGGCCAGACATTGTTACGGCTTACCTAATGAGGGCGAAAATGGCTTCGAGTTGAGAGCTGCTGACATGTAA 807 0.5601 MLPFRSFYGFESWLDQTACSEEPSSSIKSMESDEAKKPILKSISKSERKSMEACKSHREAERRRRQRINTHLSTLRSLIPNAVKSDKASLLGEVVRHVKDLRKQADDVARHREGDLSGSTISGEFGSDPRDSEQWAFPGESDEATVSYCDGGGKRKLMKATLCCEDRPNLNRDLEEAIRSVRAKAVRAEMVTIGGRTKSVVIVQWTGGEEEEEDEVGALERALTAVVENRAFVGPRLGRMSLGHKRARHCYGLPNEGENGFELRAADM 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2535 268 Pfam Helix-loop-helix DNA-binding domain 54 101 IPR011598 GO:0046983
Acco05g2535 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 110 IPR036638 GO:0046983
Acco05g2535 268 MobiDBLite consensus disorder prediction 21 63 - -
Acco05g2535 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 101 IPR011598 GO:0046983
Acco05g2535 268 MobiDBLite consensus disorder prediction 27 63 - -
Acco05g2535 268 MobiDBLite consensus disorder prediction 109 133 - -
Acco05g2535 268 Gene3D - 46 112 IPR036638 GO:0046983
Acco05g2535 268 Coils Coil 171 191 - -
Acco05g2535 268 PANTHER TRANSCRIPTION FACTOR BHLH30 31 249 IPR045847 GO:0003700|GO:0006355
Acco05g2535 268 SMART finulus 58 107 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2535 Acco-ChrAcco05 41130611 41131512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2535 49 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.398 1.68e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco05g2535 HLH 7.3e-12 No_clan