Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco05g2533 | ATGGGTGGTGGTCCGCCTTCTTTCAATCCATTCACCGGATTTTCCTTTTTCTTCTTCATCCTCTACACCACAATCATACTCCTTGCAGCCGCTGCTGCTTCTGAAACCTCATCTTCTTCTATAAGTTCCACCGTCTATGACGACGTCGCGGGAAAAAATTCGCTAGAACCGCCATCATTGGGAAGTCAACGTGGCGCAGGGGAGAGAGAGTCTCCTTTCAAGCCCACCGTGGCCATTCTAATTGGGGTATCCACAACCCTGTTTTTCACCACCTTTGTTTTTCTTCTGTGTGTTAAACTATGTAAACCAGAGGAGGACGCCCAAAGGAATTCACATACAGGAGGTGGCCATTTGGGAAGAAAGAACTCCGGCATTGACCGGGTTGTGATCGAGTCGTTACCCATTTTCAGATTCGGATCTTTAAGGGGCCAAAAAGAGGGACTCGAATGCGCCGTCTGCCTGACTCAATTTGAGACCGTGGAGGTTCTTCGGCTGCTTCCAAAATGCAAGCACGCCTTCCATGTCGAATGCGTGGACACTTGGCTGGATGCGCATTCCACTTGCCCGCTTTGCCGGTACCGGGTTGACCCGGAAGACATTCTCCTGGTTGGGGAGCCCAAAGTTTGGCCGCATAATAATCAAACCATTCCACCGATACAAGAGATCTCCGAAGATCCGCAGCATTGTACAACAGACATAGAGACCGGTCTCGGACCGGATTCACAGGATCGGTTCGATTCAAACTCACTTCCCCGGAGAGTCTCCGGGAGGCACTCATCCGTAGGGGAAAGAAGTGGTGGGTTCTTCAAGATTTTATTGCAGCGTCGAAACAGCATGGACGGCGAAACGACGACGAGGCTGCAGAAGAAAACGGCGCCGTTTAGGATGTCACTGGACAGTGCAATGTTGTCGACGAAGAGGAAAAGAAACGAAACCGGAAAAGAAAAAGAAAGTGGGGAGTGTGAGGGTCCAAGGAAAGACGGGTTACTGCTGACGGAGAAGGAGAAGAAACACAGATTGGAACACAGGATCATAGTGTCTCCGTCTCAAAAGTCCACTGAGATTCATGAGAGATGGAGCGACGTGCAGCCATCGGAATTACTATACCTGACGTCGGGGATGATACTGAGCGAATCGTGTTCCTCGTCTGGGAGGTCGCATTCAGGGCGGCGACAGAATATGCAGCAGCCACTGAACCGGAGCAGAGGAGCGAACCTTACGGGGGCAATAAATGAGAGAAGCTTGTCGGAAATCACGGGATTGAGCCGGAAGAGGAGAGAGGAAGGACGGCATCGTCGGGAAGAAGGAGAGAGAGAGGCGGGAGTAGTATCGAGATGGGGGGCCTGGATCTCTCAGGTGGGGCGATCTCGATCTGTACGGTAG | 1383 | 0.517 | MGGGPPSFNPFTGFSFFFFILYTTIILLAAAAASETSSSSISSTVYDDVAGKNSLEPPSLGSQRGAGERESPFKPTVAILIGVSTTLFFTTFVFLLCVKLCKPEEDAQRNSHTGGGHLGRKNSGIDRVVIESLPIFRFGSLRGQKEGLECAVCLTQFETVEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVGEPKVWPHNNQTIPPIQEISEDPQHCTTDIETGLGPDSQDRFDSNSLPRRVSGRHSSVGERSGGFFKILLQRRNSMDGETTTRLQKKTAPFRMSLDSAMLSTKRKRNETGKEKESGECEGPRKDGLLLTEKEKKHRLEHRIIVSPSQKSTEIHERWSDVQPSELLYLTSGMILSESCSSSGRSHSGRRQNMQQPLNRSRGANLTGAINERSLSEITGLSRKRREEGRHRREEGEREAGVVSRWGAWISQVGRSRSVR | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco05g2533 | 460 | SUPERFAMILY | RING/U-box | 128 | 197 | - | - | |
Acco05g2533 | 460 | SMART | ring_2 | 150 | 191 | IPR001841 | - | |
Acco05g2533 | 460 | MobiDBLite | consensus disorder prediction | 418 | 441 | - | - | |
Acco05g2533 | 460 | MobiDBLite | consensus disorder prediction | 304 | 326 | - | - | |
Acco05g2533 | 460 | MobiDBLite | consensus disorder prediction | 232 | 262 | - | - | |
Acco05g2533 | 460 | CDD | RING-H2_EL5-like | 149 | 192 | - | - | |
Acco05g2533 | 460 | MobiDBLite | consensus disorder prediction | 379 | 442 | - | - | |
Acco05g2533 | 460 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 125 | 199 | IPR013083 | - | |
Acco05g2533 | 460 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 50 | 457 | - | - | |
Acco05g2533 | 460 | MobiDBLite | consensus disorder prediction | 379 | 417 | - | - | |
Acco05g2533 | 460 | ProSiteProfiles | Zinc finger RING-type profile. | 150 | 192 | IPR001841 | - | |
Acco05g2533 | 460 | Pfam | Ring finger domain | 149 | 192 | IPR001841 | - | |
Acco05g2533 | 460 | FunFam | RING-H2 finger protein ATL43 | 125 | 199 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco05g2533 | Acco-ChrAcco05 | 41122472 | 41123854 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco05g2533 | 71 | 449 | C3H Transcription Factor Family | AT5G05810 | 43.641 | 2.08e-80 | 253 |