Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2529 ATGAAAGAGAAGCTAATCGGCAAAATGAATCTCCAAGAGCCCATCCGATTAGCAATTTCTACGAAACCATCGGCAACATCAACCTCTCCTTCTTCTCTGCAATCCATTGAAGAGCCCTCTCAGATGCTTGCGGAAACTGCCAAGCTTTTTCAGAAATTTCTTCAGTTTCCAGGAACTCGGGAATTCAAGCGACAATCAGGTTCAATGCAGCTGTCTCACGACATTAGGGCCTTCGATAATAGTGGATGCTGCGATTTTCATCATAAACCGATGGGCGTTGGTCGATTACATTTGGTTACCATCAATCTTTTGCCGCATGGTTTGAGGCGTGATTCTTCAGCTCTCCATCTTTTAAGCAAAGTACATGCCCCGTTAAGGCCTGTTCCTACCAGATGTAATGTTTTATTGTGCCGTTCCATATTAATGCCAAACGGAGGGAGTTGGACCCCCCTTACAGAATCTGCTTCTGTTATGTTGAAAAGGTCATATGATGTTTTGCGAGGAAGCCCCATCACTACTCAGTTGATCCCAGCCCTTGGTGTCATTGCCTTCGCTGTTTGTGGCCTTGAACCTCTTCTGCGTCTGTGCAGGATTATCTTTCTTCAAAGGAATGATAATACTTGGAATAAAAGTAGTTCGTGTGATATTATGACGTCTTATTTGCAGCCTTTGCTGCTGTGGACTGGGGTTATGCTCGTCTGCAGGGCATTAGATCCACTAACCCTCCCATCAGAAGCCAGCCAAGCGGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTCTGTCAACTGTGCTCTCATTTGCTTACTGTTTTTCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAACGAATCCAATGATGCAAGAAATATGGGATTTGATTTTGCCGGGAAAGCTGTGTATACTGCTGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCCGGTGGTTTGGGTACAGTACTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACAAAGATTGATGGATATGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCGAATCACAAGTTTACTGTCAATGTTGTGCGGAATCTTACTCAGAGAACTCATTGGCGAATCAAGACTCACCTTGCTATTAGTCACTTGGATATTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTTTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCATGTCGATACTGAAAATCAGTCTCTCATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTTTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACACCCATCCGTACAGTCCAGAAAATATACAGTGACGCTGACTTGGAAAACATACCATTTGGTGACCCCATTTTTACTCGCTCCAGAGCTGCAGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGTGAAGATAGAGCCAAGGCTCCTACTCGTTCAACACGCCCTAGTGAAGAAAAAGATGCCCAAATTGATGAAACATCGATATCTGATCCCAAAGATGAAAATCTTGTCGCGACATCAACATCAGCATCCACTGCAAACTCCAGGGATAAATCGAAGTCAATCTCTGAAGCACAAGCTCTGAATATGGGTTCTGATGGTACTGTCCTGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCTGTAGATGCAGGGAAGGGGTCTGCTGCCCCAGTAAATAAAGACCTTGCTCAAAGTGTTGCCCCTGATAATTCTTTGGCTTCTTCACATGAGTTTGCTGGAAGGGGAGATACTACTCCTGCTACATCTTTACAGGCGAAGCAGGACGAAGACAAATATGCTGTATCCTCCTCACCGGCCAGGCCTTCCCTGGAAGAAAATATTGTTCTTGGTGTTGCCCTTGAGGGCTCAAAACGGACTCTTCCAATTGACGAAGAAATGACTCCACCTCCCATCCCCACTGAGGCACAAGAATTTGCCGCCCAAAGAAATGGAAATGGATCTTCCGGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCAGAGCGATTAG 2295 0.4405 MKEKLIGKMNLQEPIRLAISTKPSATSTSPSSLQSIEEPSQMLAETAKLFQKFLQFPGTREFKRQSGSMQLSHDIRAFDNSGCCDFHHKPMGVGRLHLVTINLLPHGLRRDSSALHLLSKVHAPLRPVPTRCNVLLCRSILMPNGGSWTPLTESASVMLKRSYDVLRGSPITTQLIPALGVIAFAVCGLEPLLRLCRIIFLQRNDNTWNKSSSCDIMTSYLQPLLLWTGVMLVCRALDPLTLPSEASQAVKQRLLNFVRSLSTVLSFAYCFSSLIQQAQKFFMEANESNDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTHLAISHLDINKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVDTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSDADLENIPFGDPIFTRSRAAANRPFLLIEPPSKVNGEDRAKAPTRSTRPSEEKDAQIDETSISDPKDENLVATSTSASTANSRDKSKSISEAQALNMGSDGTVLKTSKTTQPKKESAVDAGKGSAAPVNKDLAQSVAPDNSLASSHEFAGRGDTTPATSLQAKQDEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIDEEMTPPPIPTEAQEFAAQRNGNGSSGKDKKDGQISTKQQSD 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2529 764 MobiDBLite consensus disorder prediction 552 764 - -
Acco05g2529 764 MobiDBLite consensus disorder prediction 657 691 - -
Acco05g2529 764 Pfam Mechanosensitive ion channel 301 508 IPR006685 GO:0016020|GO:0055085
Acco05g2529 764 SUPERFAMILY Sm-like ribonucleoproteins 344 414 IPR010920 -
Acco05g2529 764 Gene3D - 224 358 - -
Acco05g2529 764 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 65 759 IPR045042 -
Acco05g2529 764 Gene3D - 359 412 IPR023408 -
Acco05g2529 764 MobiDBLite consensus disorder prediction 589 637 - -
Acco05g2529 764 MobiDBLite consensus disorder prediction 557 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2529 Acco-ChrAcco05 41064631 41076943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2529 68 725 Mechanosensitive Ion Channel Family AT1G58200 55.147 0.0 723