Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2519 ATGAACGAAGAAGAGGAGAGTTTTATAGAAACGAACCCGGCGCATCCAGGGCGATATTGTAGGTTGGGAATCTATCGGGTGTATGACAGCAACCGGTCAGAAATAGAAAATAAGAAAGCAGTTTATGTATTAAATGTCGGACATTTCAAACTAATCGTCATTCATAATACAGGTATTCTTTTTGACCCTGCAAAATATGGCGCACTAAATTTGCAAGACAAACAAAAGCTAGTTCAAGAGATTGCTCGACAATCAAAAGATGCCAGAAATATGCTCTACTCCTTTACCCGCAAGGAGCTTCTAGAAATAATTTGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGATATACTAAGACTCAAATGATAGAGTATCTTCTTAAGATAATTTCTAGGAAATCCAAGTTGCGGATGGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAATTGGACCTATATCTCAAGATTTACATTATATTCCCCTGGCGAATAATAAAGAGGAAAAAGTAAAATCATTACTGTGTCAGAATGTTGCCTGCAGAGCTACTTTGTGTCCTGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTTTATGGCTGACCTGTGGATCTGATCTTGATGAGAAGGATTCATGTGGAATGTCTTGTCATTTACAATGTGCTTTGACTTATAAGAAGTCTGGCATTTTGAAGGGCATATTTAGTACAACGTTAGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTTTCGAATATCCTTGGCTCACAGAATTCTATTAGGGGCTGAGGGATACAAGGAAGTACATAAGATTGTAGAGGCTGCTCTCAAACTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGAGGCATTGTGAACAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCGTTTTGATTCAATGTTTCCTAACCTTTACCCTTACTCTGTGGAAAAGAAAAATGTACCAACATGCACTATCCGTTTTGAAGAGTGCCTTCCTACCTCTCTGGTCATTGTGCTAGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTCTGGCACAGAGCATCAACAATGGAGTACTCCGAGCAACCCACCTTCATTGTATTAAGGCCAGAAAAAAAGTTCAAGTTGGAAAATCTCCATCCTTCAACTGAGTATTTTTGCAAGGCTTCTCTTTTTAGCAGCACGGGCATTCTGGGCACTGCAGAAGCTAGATGGGTCACCCCTTGTAATCCCAGTGTATCTCCTTCAAAAGTTGCTAGAATTGGCAGTTACAGGGATCATAATAGATTTTCGCCTCATGGATCCTCTGTTACCACTTTGGACATACATGCTCAGGAAAAATACAGGATAGCGGTTGAAAATCATCATCACATGGAATCTGCCAACTCTGACGTCAATTCATTCTCCAGGGACTGTCCTGCAAAACTTTCCTTCTCTGATAAGTTTAGGGGCAGAATTGAAGGATTCCTCTCAAAGCCTCCATCGATTGAATCTGTTGCATCTAAAACTTTTGCTGCAGTTTCACCTTCCACACCTTCAAAATTGGACGAAACGAGACAAGTTACAGGTTTGGGCGGCAGAAAGCGCTTGGAGGAAAATGATTATGAGTACTCAGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATTGACCAAAACTTCAGAGTAAAGTTTCTGACTTGGTTCAGCCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGTGCTTTTGTGGATGCACTGATTGATGACCCACCGAGCTTAGTTGATCAGCTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACCTTACGTTTTTGAATTGTCAAAATCACAGTTCTATGACTTGAATTACACTTTGAGTCAGAAGCACAAGCGGCAGAAAGGTTCTTATTTCTATTTCACAGAAACATTATCCAGAACACAGAATATCACAACCCTACATCATATCAGAGCTACCCAACTTACAAGGATACCTATCTTGCTACTGGCAAATTCACTTCCAGATGAATTACATCAAAATCCCCTATGGTAG 2217 0.4014 MNEEEESFIETNPAHPGRYCRLGIYRVYDSNRSEIENKKAVYVLNVGHFKLIVIHNTGILFDPAKYGALNLQDKQKLVQEIARQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKLRMVQNNSHIGSKRKIGPISQDLHYIPLANNKEEKVKSLLCQNVACRATLCPEDAFCKRCSCCICHFYDDNKDPSLWLTCGSDLDEKDSCGMSCHLQCALTYKKSGILKGIFSTTLDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCFRISLAHRILLGAEGYKEVHKIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVERFDSMFPNLYPYSVEKKNVPTCTIRFEECLPTSLVIVLGYEDHLLKDFLGCRLWHRASTMEYSEQPTFIVLRPEKKFKLENLHPSTEYFCKASLFSSTGILGTAEARWVTPCNPSVSPSKVARIGSYRDHNRFSPHGSSVTTLDIHAQEKYRIAVENHHHMESANSDVNSFSRDCPAKLSFSDKFRGRIEGFLSKPPSIESVASKTFAAVSPSTPSKLDETRQVTGLGGRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDALIDDPPSLVDQLIHTFMDEICCEQKPYVFELSKSQFYDLNYTLSQKHKRQKGSYFYFTETLSRTQNITTLHHIRATQLTRIPILLLANSLPDELHQNPLW 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2519 738 CDD PHD_VIN3_plant 196 260 - -
Acco05g2519 738 PANTHER VIN3-LIKE PROTEIN 2-RELATED 59 519 IPR044514 GO:0010048|GO:0040029
Acco05g2519 738 Pfam PHD - plant homeodomain finger protein 176 295 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2519 Acco-ChrAcco05 41003133 41009626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2519 557 658 PHD Gene Family AT5G57380 37.255 5.69e-14 73.6