Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2515 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGACACTTCCCGGAGCATGGGTTGGATGAATCTGCGAAACAGCTATTAGATCACGAGAAGAAGAAAATTGTCAACTCCATCAGATCAGAAACCTTTGACGTTGAAAGCGACCCTAAAAAGGCAATAACAACTACTCCTACTGCCACAACGACAAAAGACGACGTCGTTTTCTCGTCTGGGAAGCACTCAGCTGTATCCGACCTTTTCACGGGCAATGACAAGTTCCGGACCAAACAGAAGCAAGTTGCTGCTTTCCGCGACTGGTGGATAGAGAAAAAAGGGGATAGATCGGGTCACGAAAAACCACACTCCCGGCGGTTCTCCTGTGAGGGGGACCGCGAGCTTCTTCTTCCACCGGAGTCCAATCCTCCGCCGCCGGAGACAGTGAAAGATGCAATCGACCGGAGTTTTGACCGTCAAGTCTCGTTGCCGAGATTATCCAGCGGCAGTAGCTATGCTGGGAGTTTGTTCTCGGGGACCACGTTGGACGGCCATTTTTCCAGCGACGTTAAGGACGAAACCACGTCGTCTCAGGTGTCCCCCACAACAAGACGACTGGAGGAAGAGGGGGAAGAAAGTAAGGAGACGTTGGCGCAGAAGTACAAAGAGAGCTTCTGCCTGCAGAGCACGCTTGCTAAGAGACTCACCTGCCTAGCAAGTCTCGCTGCCAATGAGCCTGTGCTTACTTTGGACGCTGGAATCGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCTTACTCCGACAAAATATCAGATGGTTTTTACAACATCCTGGGGATGAATCCATATCTGTGGGTGATGTGCAACGAGCCGGAGGAAGGTAGGCGGCTTCCACCTTTGATGACGCTTAAAGCAATGGAGCCAGGCGAGACGTCTATGGAGGTGGTTCTTGTAGATAGACACGAGGACTCTAGGCTAAAGGAGCTTCATGATAAAGCACAAGAATTGTATTGTGATTCAGAAAACACCTTGGTAGTGGTGGAAAAACTTGGAAAACTTGTCGCGGTATATATGGGGGGTACCTTCCCGGTGGAGCAAGGAGATCTCCACAAGCAATGGAAGATGGTTAGTAAGAGATTGAGGAATTTTCAGAAGTGTGTTATGCTTCCTATCGGCAGCCTATCTGCAGGACTTTGCAGGCATCGGGCAATCCTCTTCAAGAGATTGGCAGATTACATTGGTCTGCCATGTCGTATTGCCCGAGGTTGCAAATATTGTGCAGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGATAGGCAACTCTCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGACCAGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCTTTTCAAATTTCTCATATACTGGAATCCCGGTCCCCTTATACGGATGATGCATCAAGTTCTCGGTTTTCAAGTTCCAGTTCTGTTGTTCCTGAAAGTCATTTGTATTACGGCTGTACAAAGAAAGATCAACTGGTCAAAAGAAATGATTTGCTTAAATGTCCTGTGAACTCAAAATATGCTTCAGTTGATCAAACCCATGCAGTTAATGTAGAGGAACGTGAAGTTCTGTGTTCAAATTTGCCTTCCATTCAGGAAGGTGTTTCTGAAGACCTGCATTCAGCCAATGAGGCATTGTTGCATGAATATCCCATGCGTGCTGAGGACTCAGTTGTCATAAATGAAACTTCCAATAATGAGATCATTGTAACCGGAAGTCCAGTGGCAAAACCTACTTCTAAGAAGCTTATATCAGGCCCATCTTGCCAGTCAGAACTAGAATCTGTAGAGAGTAGACCTGAAAGCCGTGACCTTTTTTCTGCCAAAAACATTCCAAGATATTTGAATCTTGAGCCATCACTCGCCATGGATTGGCTGGAAATATCATGGGATGAATTACGCATAAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGGGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCCAGGATGATCAGTTGAAAGAGTTCCTCAGAGAGGTTGCAATAATGAAACGGGTCCGCCATCCAAATATGGTGCTCTTCATGGGCGCTGTTACAAAACAGCCTAATCTATCAATTGTAACAGAATATTTACCGAGGGGTAGTTTGTACCGTCTGATACATAGGCCAGCTTCTGGTGAAATGTTGGATCAGAGGAGACGATTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTACACTGTTTGAGCCCTCCAATTGTGCATTGGGATCTCAAATCTCCAAATTTGTTAGTTGACAAGAATTGGACTGTAAAGGTGTGTGATTTTGGGTTGTCGAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTCATCTTGTGGGAACTTGTGACCATGCAGCAACCATGGAATGGACTCAGTCCTGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTCTCTATCCCTCCAAACATCTCCCCAATATTGGCCTCCCTCATGGACTCTTGTTGGGATGATGATCCCAAGAAACGGCCTTCTTTCTCCAGTATTGTAGAATCGCTAAAGAAGCTGCTGAGATCTCCGGTGGAGATGATAAAAATGGGTGGGGCATAA 2793 0.4604 MPHRATYFFPRHFPEHGLDESAKQLLDHEKKKIVNSIRSETFDVESDPKKAITTTPTATTTKDDVVFSSGKHSAVSDLFTGNDKFRTKQKQVAAFRDWWIEKKGDRSGHEKPHSRRFSCEGDRELLLPPESNPPPPETVKDAIDRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGHFSSDVKDETTSSQVSPTTRRLEEEGEESKETLAQKYKESFCLQSTLAKRLTCLASLAANEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEPEEGRRLPPLMTLKAMEPGETSMEVVLVDRHEDSRLKELHDKAQELYCDSENTLVVVEKLGKLVAVYMGGTFPVEQGDLHKQWKMVSKRLRNFQKCVMLPIGSLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHILESRSPYTDDASSSRFSSSSSVVPESHLYYGCTKKDQLVKRNDLLKCPVNSKYASVDQTHAVNVEEREVLCSNLPSIQEGVSEDLHSANEALLHEYPMRAEDSVVINETSNNEIIVTGSPVAKPTSKKLISGPSCQSELESVESRPESRDLFSAKNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFQDDQLKEFLREVAIMKRVRHPNMVLFMGAVTKQPNLSIVTEYLPRGSLYRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLSIPPNISPILASLMDSCWDDDPKKRPSFSSIVESLKKLLRSPVEMIKMGGA 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2515 930 ProSitePatterns Protein kinases ATP-binding region signature. 666 687 IPR017441 GO:0005524
Acco05g2515 930 Gene3D Transferase(Phosphotransferase) domain 1 739 925 - -
Acco05g2515 930 PRINTS Tyrosine kinase catalytic domain signature 734 747 IPR001245 GO:0004672|GO:0006468
Acco05g2515 930 PRINTS Tyrosine kinase catalytic domain signature 841 863 IPR001245 GO:0004672|GO:0006468
Acco05g2515 930 PRINTS Tyrosine kinase catalytic domain signature 775 793 IPR001245 GO:0004672|GO:0006468
Acco05g2515 930 PRINTS Tyrosine kinase catalytic domain signature 885 907 IPR001245 GO:0004672|GO:0006468
Acco05g2515 930 Pfam Ethylene-responsive protein kinase Le-CTR1 249 457 - -
Acco05g2515 930 MobiDBLite consensus disorder prediction 177 204 - -
Acco05g2515 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Acco05g2515 930 Gene3D Phosphorylase Kinase; domain 1 653 737 - -
Acco05g2515 930 FunFam Serine/threonine-protein kinase CTR1 739 924 - -
Acco05g2515 930 ProSiteProfiles Protein kinase domain profile. 660 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2515 930 MobiDBLite consensus disorder prediction 104 123 - -
Acco05g2515 930 MobiDBLite consensus disorder prediction 104 141 - -
Acco05g2515 930 SMART serkin_6 660 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2515 930 FunFam Serine/threonine-protein kinase isoform 1 650 738 - -
Acco05g2515 930 Pfam Protein tyrosine and serine/threonine kinase 660 914 IPR001245 GO:0004672|GO:0006468
Acco05g2515 930 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 206 919 - -
Acco05g2515 930 SUPERFAMILY Protein kinase-like (PK-like) 637 913 IPR011009 -
Acco05g2515 930 CDD STKc_MAP3K-like 666 914 - -
Acco05g2515 930 MobiDBLite consensus disorder prediction 177 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2515 Acco-ChrAcco05 40970811 40976603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2515 1 929 MAP Kinase Kinase Kinase AT4G24480 57.760 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco05g2515 PK_Tyr_Ser-Thr 1.9e-65 CL0016