Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2499 ATGGTAGTGAGGAAAGTGGGGAAGTATGAGATTGGAAGGACGATTGGGGAGGGCACCTATGCAAAAGTGAAGTTTGCGCAGAACACAGAGACCGGAGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGTACCATCATCAAACACAAAATGGTGGAACAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCATACGTCGTCCGTCTCTACGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATATTGGAGTTTGTTACAGGTGGCGAATTATTTGATAAAATAGTACACCACGGGCGTGTTAGTGAAGCTGAATCAAGAAAATACTTCCAACGGCTTATTGATGGTGTAGACTTTTGCCACAGTTTGGGAGTTTACCATAGAGATTTAAAGCCTGAAAATCTCTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTCAGTATCCTTCGAACAACTTGCGGGACACCTAACTACGTAGCTCCAGAGGTACTGAGTCACAAGGGTTACAATGGTGCGATGGCAGATGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGCTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACGTTATACAGTAAGGCATGGATTCCAACACTTCCTATTAATAGAGCAGAGTTTTCATGCCCAGCCTGGTTTCCTGTGGGAGCAAAATCTTTAATACGTAGAATTTTGGATCCAAATACTGAGACTCGCATAACTATTGAACAGATACGAAATGATGAGTGGTTTAAAAAAGGCTACGTTCCTGTCAGCCTACTTGAGTATGAAGAAGTGAATTTGGATGATGTAAATGCTGCTTTTGACGATGCTGAGGATCAGACGGCTAATCAACAGAGTGAAAATGAAGACACTGGTCCTTTGCTGCTTAATGCATTTGACTTGATAATCCTGTCTCAAGGCTTAAACCTGGCATCACTATTTGATCGCCGGCAGGACTCTATGTACTCCCAAACACGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTCAAGACTCATATTCGCAACTATAAGATGAGAGTAGAGGGTATTTCAGCAGACAAGACTTCTTATTTTTCGGCGATCCTGGAAATTTTTGAAGTTGCTCCCACATTTTTTATGGTGGACATTCAAAAAACAGCTGGAGATGGGGGTGAATACCTCAAGTTTTACAAGGCATTTTGTACCAATCTGGAGGATATAATATGGAAACCGCCTCTTGAAGCAAGCAAATCAAAGATCTCCAAGACTAAAAGTAAGAAACGCTAG 1362 0.417 MVVRKVGKYEIGRTIGEGTYAKVKFAQNTETGESVAMKVLDRSTIIKHKMVEQIKREISIMKLVRHPYVVRLYEVLASRTKIYIILEFVTGGELFDKIVHHGRVSEAESRKYFQRLIDGVDFCHSLGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKAWIPTLPINRAEFSCPAWFPVGAKSLIRRILDPNTETRITIEQIRNDEWFKKGYVPVSLLEYEEVNLDDVNAAFDDAEDQTANQQSENEDTGPLLLNAFDLIILSQGLNLASLFDRRQDSMYSQTRFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADKTSYFSAILEIFEVAPTFFMVDIQKTAGDGGEYLKFYKAFCTNLEDIIWKPPLEASKSKISKTKSKKR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2499 453 Pfam Protein kinase domain 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2499 453 Coils Coil 279 306 - -
Acco05g2499 453 CDD CIPK_C 316 431 - -
Acco05g2499 453 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Acco05g2499 453 ProSiteProfiles Protein kinase domain profile. 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2499 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 414 - -
Acco05g2499 453 Pfam NAF domain 313 370 IPR004041 GO:0007165
Acco05g2499 453 Gene3D Kinase associated domain 1, KA1 309 435 - -
Acco05g2499 453 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Acco05g2499 453 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Acco05g2499 453 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Acco05g2499 453 FunFam Non-specific serine/threonine protein kinase 2 310 - -
Acco05g2499 453 Gene3D Transferase(Phosphotransferase) domain 1 89 277 - -
Acco05g2499 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Acco05g2499 453 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Acco05g2499 453 SMART serkin_6 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g2499 453 SUPERFAMILY Protein kinase-like (PK-like) 6 306 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2499 Acco-ChrAcco05 40735944 40741143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2499 1 395 CBL-interacting serine-threonine protein kinases AT4G24400 81.013 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco05g2499 Pkinase 2.9e-71 CL0016