Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2495 ATGGAGGTGTCAGAACATGATTTCTTGGAGGAATTGGTAGCTCAAAGAAGAGAAGCATGGGACACAAATCCAAGTCCAAATGAAGAAAACCAGTTCTTCTTCCCTAATAATGCTTATAATAATAACAGTTTAGACTGTTTTGATCCAAACTCTCTTGCTTTTCTCCCAAATTCCTTCTCTGATCAACAGGTGCCTCAAAGCTACAACAACTACAATAGTAGCTTCAACGAAATCTACAACTCATTACTTGATGAGTTCTCTACACCCCATATCATCGATTCATCACCACCCTATTATACAACGGTTGATACTACTTATTCTTCACTTAGCACTCCTCCTTTTCTGGTTCAAGAAGAGAATAATAATTACCCCTTAATTTCGTCCATGAATATGGAAGAAGAAGAGGGTAATTTGTTTGGAGACCTCAAAACGACATGTAAGATAGAGCCCATGAGTCATTCTCCTGAAATAATAATGCCAGTTTTCAACATGAGCACTTGTCATTTGGAGAGAAAGAATCGACCCAAGAAGCTGCTGGGACAGCCCTCCAAGAATCTAATGGCTGAGAGAAGAAGAAGAAAGAGGCTCAATGATCGTCTCTCCATGCTAAGATCTATTGTCCCCAAGATTAGTAAGATGGACAGAACATCTATAGTTGGAGACACGATAGACTACGTGAAAGAACTTCTGGAGAAGATTAAAGATTTGCAGCAAGAAATAGACTTGGATTCAAACATGGTAGGCCTTTTGAAGGATTATGCTAAACCAAATGAAATCATAATGAGAAATTCACCCAAGTTTGATGTGGAGCGAAGCAAATTAGACACGAGGGTTGAAATGTGTTGTGCAGGGAAGCCAGGGTTGTTGCTATCTACAGTGACCACCTTGGAGGCCTTTGGGCTTGAGATTCAGCAATGTGTTATCAGCTGCTTCAATGATTTTACCATGCAGGCTTCTTGCTCAGAGGAATTGGAGCACAGGGCAATAGTGGGCTCGGGAGACATAAAGCAAGCGTTATTTAGAAGTGCAGGATATGGAGGAAGATGTTTGTGA 1053 0.4065 MEVSEHDFLEELVAQRREAWDTNPSPNEENQFFFPNNAYNNNSLDCFDPNSLAFLPNSFSDQQVPQSYNNYNSSFNEIYNSLLDEFSTPHIIDSSPPYYTTVDTTYSSLSTPPFLVQEENNNYPLISSMNMEEEEGNLFGDLKTTCKIEPMSHSPEIIMPVFNMSTCHLERKNRPKKLLGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSIVGDTIDYVKELLEKIKDLQQEIDLDSNMVGLLKDYAKPNEIIMRNSPKFDVERSKLDTRVEMCCAGKPGLLLSTVTTLEAFGLEIQQCVISCFNDFTMQASCSEELEHRAIVGSGDIKQALFRSAGYGGRCL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2495 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 243 IPR036638 GO:0046983
Acco05g2495 350 Coils Coil 226 246 - -
Acco05g2495 350 Gene3D - 180 245 IPR036638 GO:0046983
Acco05g2495 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Acco05g2495 350 SMART finulus 186 235 IPR011598 GO:0046983
Acco05g2495 350 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 67 344 - -
Acco05g2495 350 Pfam Helix-loop-helix DNA-binding domain 186 229 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2495 Acco-ChrAcco05 40688075 40689471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2495 103 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 51.373 4.55e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco05g2495 HLH 4.8e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2495 05 40688075 40689471 Acco05g2495 05 40688075 40689471 ECH